Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 AC245047.3-201ENST00000429428 127 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 AL117339.2-201ENST00000430475 180 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 PGBD4P5-201ENST00000445958 426 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 HMGN1P18-201ENST00000457642 277 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 RN7SL604P-201ENST00000492589 296 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 AC245166.1-201ENST00000521012 253 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 HSPE1P19-201ENST00000603327 295 ntBASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDPF1Q6NVV7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC093831.2-201ENST00000624393 3427 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 RNU6-1099P-201ENST00000363533 107 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 SNORD38C-201ENST00000384381 69 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 MIR1262-201ENST00000408276 93 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 MIR1251-201ENST00000408552 70 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 Y_RNA.601-201ENST00000410500 113 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AL035398.1-201ENST00000430869 322 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AL606517.2-201ENST00000442855 241 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP519-201ENST00000516480 119 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC006130.2-201ENST00000586202 326 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC008739.3-201ENST00000603262 127 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 AC087741.2-201ENST00000619415 172 ntBASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDPF1Q6NVV7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 Y_RNA.10-201ENST00000362371 110 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RNU6-661P-201ENST00000362409 107 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP493-201ENST00000364115 91 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 SNORA27-201ENST00000384323 126 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 Y_RNA.507-201ENST00000384500 99 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RN7SKP200-201ENST00000410564 320 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP144-201ENST00000410846 116 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RNU6-592P-201ENST00000411333 103 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 RNU6-893P-201ENST00000458841 100 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 SNORA84-201ENST00000459229 133 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 AC034105.4-201ENST00000568304 277 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 AL590808.1-201ENST00000618696 141 ntBASIC2.76□□□□□ -1.97
CDPF1Q6NVV7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 SNORD115-19-201ENST00000363098 82 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 SNORD115-18-201ENST00000363293 82 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 SNORD115-17-201ENST00000364612 82 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 RNU4-16P-201ENST00000364737 141 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 RNU6-1134P-201ENST00000365156 101 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP283-201ENST00000365604 119 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 AL049873.1-201ENST00000480540 376 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 AC113410.1-201ENST00000505029 247 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 AC114811.1-201ENST00000507207 168 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 MIR3169-201ENST00000578032 83 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 MIR6867-201ENST00000610636 67 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDPF1Q6NVV7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 AL442644.1-201ENST00000454390 3105 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP383-201ENST00000362934 120 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 MIR23A-201ENST00000385245 73 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 AL022718.1-201ENST00000412004 84 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 SNX2P2-201ENST00000424553 323 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RNU7-96P-201ENST00000459535 64 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RN7SL75P-201ENST00000461926 281 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RN7SL271P-201ENST00000487601 295 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RPS23P4-201ENST00000487908 423 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 RNU6-998P-201ENST00000515894 101 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 AC004812.1-201ENST00000540773 146 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 MIR3618-201ENST00000580330 88 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 FAM71BP1-201ENST00000604431 523 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 uc_338.25-201ENST00000613756 156 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 MIR6075-201ENST00000620782 95 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 AC027279.3-201ENST00000625055 122 ntBASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDPF1Q6NVV7 MIR342-201ENST00000362212 99 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 MIR372-201ENST00000362225 67 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 RNU6-363P-201ENST00000362895 105 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 Y_RNA.219-201ENST00000364232 113 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP42-201ENST00000364278 115 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 RNA5SP130-201ENST00000364431 114 ntBASIC2.73□□□□□ -1.97
CDPF1Q6NVV7 RNU6-163P-201ENST00000384396 106 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms