Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU6-298P-201ENST00000390888 96 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 MTND1P35-201ENST00000526739 508 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 AC009159.2-201ENST00000617603 606 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 RNU6-726P-201ENST00000364680 107 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 MIR378D2-201ENST00000580636 98 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 MIR4791-201ENST00000607666 84 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 AC139792.3-201ENST00000623525 224 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 AC008873.1-201ENST00000625051 138 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 MIR148A-201ENST00000362215 68 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 SNORD50B-201ENST00000364995 70 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 MIR516B1-201ENST00000385211 90 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 snoU13.2-201ENST00000459201 104 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 snoU13.16-201ENST00000459350 104 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 RNA5SP66-201ENST00000517178 101 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 SNORA25.17-201ENST00000517184 124 ntBASIC-1.21□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-609P-201ENST00000365459 107 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-641P-201ENST00000384006 107 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 MIR1257-201ENST00000408490 117 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-685P-201ENST00000517088 95 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 Z94722.1-201ENST00000604328 474 ntBASIC-1.22□□□□□ -2.6
NUP188Q5SRE5 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 SNORA75.4-201ENST00000391278 119 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 MTCO2P3-201ENST00000442543 421 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 MTND1P12-201ENST00000455231 147 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 AC010587.1-201ENST00000505809 469 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 AC040926.1-201ENST00000530195 238 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 AL157687.1-201ENST00000554853 619 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 AC093726.3-201ENST00000637588 150 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 SNORD115-2-201ENST00000362842 82 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 BNIP3P39-201ENST00000601077 554 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 MIR6740-201ENST00000618268 113 ntBASIC-1.23□□□□□ -2.61
NUP188Q5SRE5 RNU6-227P-201ENST00000362865 103 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 AC090844.1-201ENST00000422019 156 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 UQCRBP2-201ENST00000447827 297 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 AC093023.1-201ENST00000547375 507 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 MTND3P13-201ENST00000574391 343 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 AC069431.2-201ENST00000604149 1099 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 MIR8055-201ENST00000610739 97 ntBASIC-1.24□□□□□ -2.61
NUP188Q5SRE5 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNY4P6-201ENST00000363667 96 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-324P-201ENST00000363957 106 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-468P-201ENST00000384003 109 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-434P-201ENST00000384376 107 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 SNORD93-201ENST00000408813 74 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 HIF1AP1-201ENST00000553642 175 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 MTND4P33-201ENST00000556706 766 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 RMST_3.1-201ENST00000611651 109 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 AC005609.4-201ENST00000625071 447 ntBASIC-1.25□□□□□ -2.61
NUP188Q5SRE5 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 SNORA20B-201ENST00000384220 132 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 RNU6-535P-201ENST00000384722 107 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 MIR873-201ENST00000401120 77 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 RNU6-847P-201ENST00000411115 108 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 USP9YP21-201ENST00000420603 432 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 MTND2P30-201ENST00000456663 382 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 MTND1P5-201ENST00000517906 940 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AC006927.2-201ENST00000639256 389 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AC073869.9-201ENST00000641610 120 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AC021146.6-201ENST00000514659 117 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 RNU6-158P-201ENST00000517104 100 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AC131235.4-201ENST00000609288 620 ntBASIC-1.26□□□□□ -2.61
NUP188Q5SRE5 AC010332.2-201ENST00000613083 1904 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 SNORA1.2-201ENST00000365189 134 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 SNORA22B-201ENST00000383876 138 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 MIR522-201ENST00000385071 87 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AP003168.1-201ENST00000530091 307 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 MIR3941-201ENST00000582572 103 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AF250324.2-201ENST00000608299 610 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms