Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AL356292.1-201ENST00000283110 373 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNU1-96P-201ENST00000364163 162 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNU6-200P-201ENST00000364743 107 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNY4P28-201ENST00000365281 93 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 SNORA26.5-201ENST00000391215 123 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 MIR1298-201ENST00000408783 112 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNU6-138P-201ENST00000515952 107 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 SNORA44.1-201ENST00000517031 108 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 MIR4438-201ENST00000585271 93 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AC069114.2-201ENST00000604699 304 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AC011921.3-201ENST00000605540 361 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AL078604.3-201ENST00000615580 211 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 AC073349.3-201ENST00000617616 186 ntBASIC2.35□□□□□ -2.03
LONRF3Q496Y0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LONRF3Q496Y0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 SNORA72.4-201ENST00000384174 132 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 SNORD116-13-201ENST00000384408 92 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 RNU6-417P-201ENST00000384712 107 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 RNU2-7P-201ENST00000410794 178 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 RPS20P10-201ENST00000451209 253 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 U8.19-201ENST00000459095 133 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 RNU6-63P-201ENST00000516690 95 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 AL137100.2-201ENST00000555786 315 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 AC022513.1-201ENST00000624512 117 ntBASIC2.34□□□□□ -2.03
LONRF3Q496Y0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
LONRF3Q496Y0 AC134026.1-201ENST00000623249 2239 ntBASIC2.33□□□□□ -2.04
LONRF3Q496Y0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.33□□□□□ -2.04
LONRF3Q496Y0 MIR4769-201ENST00000584126 77 ntBASIC2.33□□□□□ -2.04
LONRF3Q496Y0 U6.73-201ENST00000619194 103 ntBASIC2.33□□□□□ -2.04
LONRF3Q496Y0 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
LONRF3Q496Y0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
LONRF3Q496Y0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 RNU1-22P-201ENST00000363334 158 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.199-201ENST00000364014 102 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 RNU6-117P-201ENST00000365415 107 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 AC097462.1-201ENST00000514125 324 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 RNU1-40P-201ENST00000516816 164 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 RNU1-97P-201ENST00000516872 164 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 AC004832.4-201ENST00000608952 331 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 AL353149.1-201ENST00000610667 244 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
LONRF3Q496Y0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LONRF3Q496Y0 RNA5SP99-201ENST00000364020 114 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 RNA5SP138-201ENST00000365098 114 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 MTCO2P33-201ENST00000402100 465 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 AC010154.1-201ENST00000425857 269 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 HSPE1P21-201ENST00000438283 308 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 AC104332.1-201ENST00000440471 797 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 COX6CP14-201ENST00000469580 174 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 RNU7-172P-201ENST00000517125 64 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 AC068647.2-201ENST00000637380 353 ntBASIC2.31□□□□□ -2.04
LONRF3Q496Y0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LONRF3Q496Y0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LONRF3Q496Y0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.3□□□□□ -2.04
LONRF3Q496Y0 AL117342.1-201ENST00000404861 406 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 RNA5SP511-201ENST00000410487 115 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 EBAG9P1-201ENST00000418955 543 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 MTND5P15-201ENST00000434246 349 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 RNU7-141P-201ENST00000459304 62 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 SNORA31.17-201ENST00000516953 127 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.3□□□□□ -2.04
LONRF3Q496Y0 AC015712.3-201ENST00000559380 164 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.3□□□□□ -2.04
LONRF3Q496Y0 MIR3198-2-201ENST00000577868 80 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 AC013791.1-201ENST00000616619 62 ntBASIC2.3□□□□□ -2.04
LONRF3Q496Y0 MIR411-201ENST00000362239 96 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RNU6-899P-201ENST00000363947 107 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 U8.7-201ENST00000364940 136 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RNA5SP467-201ENST00000391274 118 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.29□□□□□ -2.04
LONRF3Q496Y0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RPL36AP21-201ENST00000490372 323 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.29□□□□□ -2.04
LONRF3Q496Y0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms