Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 AC006380.1-201ENST00000603598 186 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 AC113139.1-201ENST00000605049 239 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 AC005828.6-201ENST00000606610 232 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 AC242852.1-201ENST00000612151 96 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 AC244015.1-201ENST00000622301 99 ntBASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRIT3Q3SXY7 MIR330-201ENST00000362196 94 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 SNORA1B-201ENST00000362535 133 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 CALM2P4-201ENST00000430810 426 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 FCF1P4-201ENST00000448326 183 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 RPL30P15-201ENST00000457129 321 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 AL049830.1-201ENST00000468034 425 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 OR9P1P-201ENST00000496431 281 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 PRDX4P1-201ENST00000507189 574 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 RNU7-12P-201ENST00000516030 62 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 SNORA70.12-201ENST00000516084 153 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 RNU6-559P-201ENST00000516151 98 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 AC087588.2-201ENST00000617667 426 ntBASIC1.09□□□□□ -2.23
LRIT3Q3SXY7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU6-926P-201ENST00000384075 107 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU6-890P-201ENST00000384121 107 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU6-35P-201ENST00000384530 107 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 U8.16-201ENST00000391279 133 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AL451046.2-201ENST00000403074 277 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AL358176.2-201ENST00000425769 204 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU6-120P-201ENST00000516077 103 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AL358944.1-201ENST00000528537 144 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AC023442.1-201ENST00000531247 422 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 AC004467.1-201ENST00000615678 330 ntBASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LRIT3Q3SXY7 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 RNU6-117P-201ENST00000365415 107 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 RNU6-136P-201ENST00000384663 107 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 MIR628-201ENST00000385229 95 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 RNU7-169P-201ENST00000459456 61 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC105758.1-201ENST00000506038 399 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 RNU6-470P-201ENST00000515954 104 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC090049.2-201ENST00000550377 109 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC099654.14-201ENST00000638599 341 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 AC005592.1-201ENST00000566527 1640 ntBASIC1.07□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 SNORA2.2-201ENST00000365473 135 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 SNORA20.3-201ENST00000516880 132 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 RNU6-165P-201ENST00000517170 99 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 BX284668.6-201ENST00000606899 438 ntBASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LRIT3Q3SXY7 RNU6-961P-201ENST00000363893 105 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.384-201ENST00000383909 102 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 RNY3P4-201ENST00000384428 101 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORD78.2-201ENST00000391076 69 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 AC138393.2-201ENST00000414742 246 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 AC099799.1-201ENST00000439809 192 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 AC093850.1-201ENST00000454121 251 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 ELOCP24-201ENST00000456370 334 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 RNU6-63P-201ENST00000516690 95 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 AL355073.2-201ENST00000612106 557 ntBASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
LRIT3Q3SXY7 SNORD115-30-201ENST00000364117 82 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 AC004941.2-201ENST00000427009 228 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 MTCO3P10-201ENST00000455912 772 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 RNU6-947P-201ENST00000516264 106 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 AC005176.2-201ENST00000596933 147 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 298.1 ms