Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RSPO4Q2I0M5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RSPO4Q2I0M5 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 SNORD58A-201ENST00000383875 65 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 RNU6-616P-201ENST00000384353 107 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.545-201ENST00000384652 105 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 RNU6-679P-201ENST00000391003 106 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 AC099677.2-201ENST00000436385 175 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 HMGN2P7-201ENST00000456186 273 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 RN7SL93P-201ENST00000463035 293 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 RPS23P4-201ENST00000487908 423 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 RNU6-579P-201ENST00000516879 102 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 MIR4778-201ENST00000577635 80 ntBASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO4Q2I0M5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.37-201ENST00000362606 108 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 SNORD31B-201ENST00000364977 69 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.440-201ENST00000384120 114 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 SNORA70B-201ENST00000384210 135 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 RNU6-1201P-201ENST00000384227 107 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 AC020914.4-201ENST00000597690 277 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 HSPE1P19-201ENST00000603327 295 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 ZNF271P-202ENST00000465539 1970 ntBASIC3.2□□□□□ -1.9
RSPO4Q2I0M5 AC091564.4-201ENST00000533934 2194 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 SNORD115-28-201ENST00000363931 81 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 RNU6-743P-201ENST00000364151 106 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 RNU4-16P-201ENST00000364737 141 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 RNU6-234P-201ENST00000365229 104 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.430-201ENST00000384081 110 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 U8.15-201ENST00000390947 134 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 SNORA7.5-201ENST00000410672 110 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 snoU13.26-201ENST00000459452 105 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 RPL23AP63-201ENST00000498752 471 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 AC095038.3-201ENST00000634439 195 ntBASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.19□□□□□ -1.9
RSPO4Q2I0M5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNA5SP502-201ENST00000362694 119 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.351-201ENST00000365436 96 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNA5SP129-201ENST00000410276 118 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 AC108938.1-201ENST00000451204 136 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNU7-80P-201ENST00000459562 61 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RN7SL594P-201ENST00000470590 287 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNU1-41P-201ENST00000516161 162 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNU1-48P-201ENST00000516400 162 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 RNU7-25P-201ENST00000516544 62 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 SNORD36C-201ENST00000516733 66 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 AC091932.4-201ENST00000623386 200 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
RSPO4Q2I0M5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 RPL23AP48-201ENST00000406913 488 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC009414.1-201ENST00000427200 443 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC233266.1-201ENST00000454518 96 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 Y_RNA.714-201ENST00000517065 90 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC004812.1-201ENST00000540773 146 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC079598.5-201ENST00000547460 117 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 MIR4439-201ENST00000583746 80 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC242852.1-201ENST00000612151 96 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 AC244015.1-201ENST00000622301 99 ntBASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO4Q2I0M5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms