Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 RPS26P45-201ENST00000471748 340 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 RNU6-475P-201ENST00000516073 104 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 Y_RNA.683-201ENST00000516508 93 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 SNORA40.14-201ENST00000516543 86 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 AC027419.1-201ENST00000522976 328 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 SNORD11B-201ENST00000607707 90 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 AL138825.1-201ENST00000618587 192 ntBASIC1.06□□□□□ -2.24
SF3A2Q15428 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
SF3A2Q15428 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SF3A2Q15428 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SF3A2Q15428 Y_RNA.27-201ENST00000362540 103 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 SNORA63-201ENST00000363450 132 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 Y_RNA.326-201ENST00000365176 113 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 SNORA33.2-201ENST00000365413 134 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 MRPL42P3-201ENST00000401492 326 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 SNORD12B-201ENST00000410433 91 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.05□□□□□ -2.24
SF3A2Q15428 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 SNX2P2-201ENST00000424553 323 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.05□□□□□ -2.24
SF3A2Q15428 AC010469.2-201ENST00000496412 480 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 AC025647.1-201ENST00000517879 253 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
SF3A2Q15428 AC040896.1-201ENST00000613819 479 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 AL357075.2-201ENST00000614906 189 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.05□□□□□ -2.24
SF3A2Q15428 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 snoZ196.1-201ENST00000625269 89 ntBASIC1.05□□□□□ -2.24
SF3A2Q15428 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
SF3A2Q15428 Y_RNA.178-201ENST00000363832 102 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 RNA5SP259-201ENST00000365541 109 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 SNORD14.1-201ENST00000365609 90 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.424-201ENST00000384063 103 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 RNU6-926P-201ENST00000384075 107 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SF3A2Q15428 RNA5SP323-201ENST00000391094 133 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 RNU6-1186P-201ENST00000410429 97 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 UQCRBP2-201ENST00000447827 297 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.04□□□□□ -2.24
SF3A2Q15428 PCNPP5-201ENST00000452246 481 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 SNORA40.9-201ENST00000515895 93 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 RNU6-1012P-201ENST00000516606 109 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 RNU6-1137P-201ENST00000517073 99 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AC040926.1-201ENST00000530195 238 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.04□□□□□ -2.24
SF3A2Q15428 AL442663.2-201ENST00000554385 511 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AC104695.3-201ENST00000604052 296 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.812-201ENST00000610788 101 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.784-201ENST00000613803 101 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.787-201ENST00000616522 101 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.780-201ENST00000617336 101 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 Y_RNA.801-201ENST00000619005 101 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 AC008873.1-201ENST00000625051 138 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 U6.92-201ENST00000636464 89 ntBASIC1.04□□□□□ -2.24
SF3A2Q15428 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SF3A2Q15428 Y_RNA.158-201ENST00000363651 101 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 U3.8-201ENST00000363675 217 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 RNU6-450P-201ENST00000364654 107 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC117470.1-201ENST00000381974 330 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 Y_RNA.389-201ENST00000383924 113 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SF3A2Q15428 RNU6-823P-201ENST00000391042 103 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 SNORD78.2-201ENST00000391076 69 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AL590004.1-201ENST00000405321 300 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 ELOCP21-201ENST00000412558 336 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 FCF1P4-201ENST00000448326 183 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC074133.1-201ENST00000515696 183 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 RNU6-408P-201ENST00000515910 100 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 RNU6-1146P-201ENST00000516282 102 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 RNU6-107P-201ENST00000516643 102 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 CYCSP23-201ENST00000519781 313 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.03□□□□□ -2.24
SF3A2Q15428 MIR4659A-201ENST00000580269 81 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 MIR4680-201ENST00000580906 66 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC022432.1-201ENST00000595739 310 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 RPS29P30-201ENST00000600975 111 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AL929325.1-201ENST00000603096 117 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC124312.5-201ENST00000604451 268 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AL353621.2-201ENST00000605340 133 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.03□□□□□ -2.24
SF3A2Q15428 AC011476.5-201ENST00000615594 130 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 U6.108-201ENST00000637764 58 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 AC099654.10-201ENST00000640395 161 ntBASIC1.03□□□□□ -2.24
SF3A2Q15428 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SF3A2Q15428 RNU6-961P-201ENST00000363893 105 ntBASIC1.02□□□□□ -2.25
SF3A2Q15428 RNU4-50P-201ENST00000364361 141 ntBASIC1.02□□□□□ -2.25
SF3A2Q15428 RNU6-1240P-201ENST00000365155 104 ntBASIC1.02□□□□□ -2.25
SF3A2Q15428 RNU6-639P-201ENST00000384074 107 ntBASIC1.02□□□□□ -2.25
SF3A2Q15428 Y_RNA.458-201ENST00000384240 102 ntBASIC1.02□□□□□ -2.25
SF3A2Q15428 Y_RNA.498-201ENST00000384460 102 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms