Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 MIR329-1-201ENST00000385028 80 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 MIR1912-201ENST00000410389 80 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 AL354751.2-201ENST00000415471 210 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 AL162725.1-201ENST00000435405 301 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.34□□□□□ -2.36
CACNA1SQ13698 RNU6-1110P-201ENST00000516462 101 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 AF235103.2-201ENST00000525753 346 ntBASIC0.34□□□□□ -2.36
CACNA1SQ13698 Y_RNA.41-201ENST00000362646 102 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 Y_RNA.157-201ENST00000363638 102 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 Y_RNA.212-201ENST00000364177 102 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 snoU2-30.1-201ENST00000365012 70 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-396P-201ENST00000365369 105 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-842P-201ENST00000384269 107 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-700P-201ENST00000391043 107 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 MTND2P22-201ENST00000444325 1033 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-864P-201ENST00000516256 108 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 AL353765.1-201ENST00000605514 183 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 MIR6086-201ENST00000638065 55 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CACNA1SQ13698 SNORD18A-201ENST00000363753 72 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 SNORD38C-201ENST00000384381 69 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-125P-201ENST00000384505 107 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CACNA1SQ13698 MRPS18CP6-201ENST00000423587 223 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RPEP5-201ENST00000441137 268 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU2-56P-201ENST00000516826 190 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 RNU6-1096P-201ENST00000517089 102 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 AC027419.1-201ENST00000522976 328 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 AC018448.1-201ENST00000552843 316 ntBASIC0.33□□□□□ -2.36
CACNA1SQ13698 AP000568.1-201ENST00000282964 442 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 Y_RNA.370-201ENST00000365589 108 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 RNU6-35P-201ENST00000384530 107 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 Y_RNA.517-201ENST00000384551 106 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 SNORA2B-201ENST00000384583 137 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 Y_RNA.537-201ENST00000384626 109 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 RPL23AP50-201ENST00000434149 455 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 RNU6-329P-201ENST00000459618 107 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 RNU6-506P-201ENST00000516553 94 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1SQ13698 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1SQ13698 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1SQ13698 AC120024.3-201ENST00000603167 156 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1SQ13698 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
CACNA1SQ13698 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
CACNA1SQ13698 AC005592.1-201ENST00000566527 1640 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CACNA1SQ13698 SNORD105-201ENST00000386910 85 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 RNA5SP118-201ENST00000410385 109 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1SQ13698 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1SQ13698 MIR548AR-201ENST00000582191 57 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC100812.1-201ENST00000607622 580 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC092794.2-201ENST00000620933 563 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 Y_RNA.51-201ENST00000362725 102 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1SQ13698 MTND1P4-201ENST00000435196 415 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AL137792.2-201ENST00000443484 235 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 MRPS10P1-201ENST00000448483 130 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AP000870.1-201ENST00000472927 406 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 RNU6-835P-201ENST00000516974 104 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 SNORA74.3-201ENST00000517108 154 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC245505.1-201ENST00000556398 224 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC018462.2-201ENST00000605375 395 ntBASIC0.31□□□□□ -2.36
CACNA1SQ13698 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 Y_RNA.148-201ENST00000363557 117 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 RNU2-54P-201ENST00000410299 190 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 USP9YP30-201ENST00000430729 455 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 AC114811.1-201ENST00000507207 168 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 AL355375.2-201ENST00000574825 175 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 MIR5188-201ENST00000583467 113 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 MIR3611-201ENST00000584484 83 ntBASIC0.3□□□□□ -2.36
CACNA1SQ13698 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.3□□□□□ -2.36
CACNA1SQ13698 RNU6-442P-201ENST00000383968 104 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC018710.1-201ENST00000506509 158 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 RNU6-1281P-201ENST00000516223 105 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 RNU6-1337P-201ENST00000516525 95 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 RNU4-77P-201ENST00000516692 156 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC024909.2-201ENST00000553035 286 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 MTND3P12-201ENST00000559068 328 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 MIR4667-201ENST00000578933 66 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AL096861.1-201ENST00000610899 123 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC090617.10-201ENST00000624308 134 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 RNU6-1301P-201ENST00000362724 104 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 Y_RNA.60-201ENST00000362831 98 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 Y_RNA.124-201ENST00000363339 93 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 MIR452-201ENST00000385020 85 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 MIR1302-7-201ENST00000408841 72 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC116353.2-201ENST00000505332 712 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 RNU6-107P-201ENST00000516643 102 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 SNORA18.7-201ENST00000516910 131 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1SQ13698 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.29□□□□□ -2.36
CACNA1SQ13698 AP000770.2-201ENST00000623694 100 ntBASIC0.29□□□□□ -2.36
CACNA1SQ13698 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms