Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.88□□□□□ -2.27
SMARCB1Q12824 AC113139.1-201ENST00000605049 239 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 SNORA28-201ENST00000606769 126 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.88□□□□□ -2.27
SMARCB1Q12824 AC025253.1-201ENST00000613623 543 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SMARCB1Q12824 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
SMARCB1Q12824 Y_RNA.303-201ENST00000364998 94 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 MIR625-201ENST00000385047 85 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.87□□□□□ -2.27
SMARCB1Q12824 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.87□□□□□ -2.27
SMARCB1Q12824 HSPE1P13-201ENST00000451143 297 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC233266.1-201ENST00000454518 96 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 RNU6-1012P-201ENST00000516606 109 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 MIR2355-201ENST00000517199 87 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 RPL21P9-201ENST00000556149 474 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 MIR3684-201ENST00000579779 74 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AL513534.2-201ENST00000603836 250 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC242852.1-201ENST00000612151 96 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC084781.2-201ENST00000615568 161 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC240442.1-201ENST00000616055 283 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 AC244015.1-201ENST00000622301 99 ntBASIC0.87□□□□□ -2.27
SMARCB1Q12824 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 RNY3P4-201ENST00000384428 101 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 AL031003.1-201ENST00000404229 172 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.86□□□□□ -2.27
SMARCB1Q12824 AC104332.1-201ENST00000440471 797 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 ELOCP24-201ENST00000456370 334 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 AC082651.2-201ENST00000496833 166 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 SNORA25.10-201ENST00000515926 124 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 RNU7-12P-201ENST00000516030 62 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 RNU6-699P-201ENST00000517081 110 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 AC090049.2-201ENST00000550377 109 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 MIR5690-201ENST00000583739 73 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 BX284668.6-201ENST00000606899 438 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 AL132765.2-201ENST00000610812 351 ntBASIC0.86□□□□□ -2.27
SMARCB1Q12824 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SMARCB1Q12824 SNORD114-7-201ENST00000362520 77 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 MIR520G-201ENST00000385064 90 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SMARCB1Q12824 Y_RNA.653-201ENST00000459091 95 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 GHRLOS.1-201ENST00000610995 70 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 AC022709.1-201ENST00000615967 87 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 AL008636.1-201ENST00000625038 1018 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 U6.92-201ENST00000636464 89 ntBASIC0.85□□□□□ -2.27
SMARCB1Q12824 Y_RNA.354-201ENST00000365448 111 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNU6-20P-201ENST00000384106 107 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 Y_RNA.496-201ENST00000384444 101 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNY4P36-201ENST00000391116 96 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNA5SP482-201ENST00000391269 118 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNU2-54P-201ENST00000410299 190 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNU6-1054P-201ENST00000411293 104 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.84□□□□□ -2.27
SMARCB1Q12824 PIGPP3-201ENST00000425307 415 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 AL162725.1-201ENST00000435405 301 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 FCF1P4-201ENST00000448326 183 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RPS26P48-201ENST00000491713 339 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNU7-28P-201ENST00000516759 62 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 Y_RNA.718-201ENST00000517110 102 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 RNU6-264P-201ENST00000517134 104 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 U2.1-201ENST00000618978 145 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 MIR1302-1-201ENST00000637932 143 ntBASIC0.84□□□□□ -2.27
SMARCB1Q12824 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
SMARCB1Q12824 Y_RNA.142-201ENST00000363491 102 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 Y_RNA.314-201ENST00000365114 102 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 RNU6-1310P-201ENST00000384153 107 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 RNU6-1297P-201ENST00000384415 104 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 RNU2-61P-201ENST00000411069 191 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC093019.1-201ENST00000443135 252 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC091951.2-201ENST00000500762 203 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 PRDX4P1-201ENST00000507189 574 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 RNU6-436P-201ENST00000516171 114 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 MIR4659A-201ENST00000580269 81 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC005730.3-201ENST00000583067 366 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC004832.4-201ENST00000608952 331 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AL096861.1-201ENST00000610899 123 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC122108.2-201ENST00000611946 526 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AL591926.4-201ENST00000616895 298 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 AC104985.2-201ENST00000620598 500 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
SMARCB1Q12824 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMARCB1Q12824 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms