Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-245P-201ENST00000384020 107 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 SNORA75.4-201ENST00000391278 119 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGXB3Q12766 MTCO2P11-201ENST00000431069 680 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGXB3Q12766 MTND1P12-201ENST00000455231 147 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 MTND2P30-201ENST00000456663 382 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 snoU13.16-201ENST00000459350 104 ntBASIC-1.01□□□□□ -2.57
HMGXB3Q12766 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGXB3Q12766 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.01□□□□□ -2.57
HMGXB3Q12766 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.02□□□□□ -2.57
HMGXB3Q12766 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.02□□□□□ -2.57
HMGXB3Q12766 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.02□□□□□ -2.57
HMGXB3Q12766 FGF7P1-201ENST00000582820 288 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 AL359999.1-201ENST00000604513 294 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 SNORA70.25-201ENST00000612741 95 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 AC068137.4-201ENST00000638485 296 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 ZNF299P-201ENST00000406845 1804 ntBASIC-1.02□□□□□ -2.57
HMGXB3Q12766 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 RNU6-376P-201ENST00000384731 106 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 MIR570-201ENST00000384917 97 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 RNU6-298P-201ENST00000390888 96 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 AL359672.1-201ENST00000442302 409 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.03□□□□□ -2.57
HMGXB3Q12766 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.03□□□□□ -2.57
HMGXB3Q12766 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.03□□□□□ -2.57
HMGXB3Q12766 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 MIR3118-1-201ENST00000581787 76 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 AC084368.1-201ENST00000620935 65 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 AC093726.3-201ENST00000637588 150 ntBASIC-1.03□□□□□ -2.57
HMGXB3Q12766 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNU6-740P-201ENST00000364734 105 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 SNORA22B-201ENST00000383876 138 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNU6-723P-201ENST00000383973 107 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AL138752.1-201ENST00000452964 351 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC091959.1-201ENST00000495857 238 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC021146.6-201ENST00000514659 117 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNA5SP20-201ENST00000515976 84 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNU6-881P-201ENST00000516813 102 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNA5SP54-201ENST00000516951 92 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.04□□□□□ -2.58
HMGXB3Q12766 MIR6740-201ENST00000618268 113 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC137590.2-201ENST00000619709 240 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.04□□□□□ -2.58
HMGXB3Q12766 AC010332.2-201ENST00000613083 1904 ntBASIC-1.04□□□□□ -2.58
HMGXB3Q12766 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-726P-201ENST00000364680 107 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 MTND4P18-201ENST00000447010 465 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.05□□□□□ -2.58
HMGXB3Q12766 AC079140.5-201ENST00000507882 310 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 SNORD45.4-201ENST00000516629 73 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 MTND1P5-201ENST00000517906 940 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 AC005609.4-201ENST00000625071 447 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 AL445984.1-201ENST00000637834 659 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-47P-201ENST00000383866 107 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-116P-201ENST00000384042 109 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNY3P14-201ENST00000384309 102 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 SNORA40.2-201ENST00000390847 128 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 MTATP6P26-201ENST00000445926 662 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 AC093303.1-201ENST00000514549 295 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-475P-201ENST00000516073 104 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 MIR8066-201ENST00000617280 78 ntBASIC-1.05□□□□□ -2.58
HMGXB3Q12766 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 SNORD87-201ENST00000364849 89 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU6-609P-201ENST00000365459 107 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU6-641P-201ENST00000384006 107 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 MTND4P3-201ENST00000417829 541 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 AC090844.1-201ENST00000422019 156 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 SNRPGP10-201ENST00000432323 225 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU2-13P-201ENST00000515909 113 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU6-830P-201ENST00000516353 107 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNA5SP169-201ENST00000517268 117 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 MTND4P33-201ENST00000556706 766 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 MIR4791-201ENST00000607666 84 ntBASIC-1.06□□□□□ -2.58
HMGXB3Q12766 RNU4-36P-201ENST00000364294 144 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.07□□□□□ -2.58
HMGXB3Q12766 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AP003168.1-201ENST00000530091 307 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC069431.2-201ENST00000604149 1099 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC131235.4-201ENST00000609288 620 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC009159.2-201ENST00000617603 606 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.07□□□□□ -2.58
HMGXB3Q12766 AC006927.2-201ENST00000639256 389 ntBASIC-1.07□□□□□ -2.58
HMGXB3Q12766 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms