Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC127459.3-201ENST00000624328 466 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC010332.2-201ENST00000613083 1904 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 MIR487A-201ENST00000385009 80 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 SNORD115.1-201ENST00000391109 76 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.15□□□□□ -2.59
CPSF1Q10570 MTND2P32-201ENST00000521584 1038 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 AC022784.5-201ENST00000522241 437 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 MTND1P35-201ENST00000526739 508 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNU6-266P-201ENST00000364225 107 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNY3-201ENST00000365484 102 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNU6-136P-201ENST00000384663 107 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 MRPL42P2-201ENST00000403169 426 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.15□□□□□ -2.59
CPSF1Q10570 AL137792.2-201ENST00000443484 235 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 HMGN2P32-201ENST00000444648 269 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RPL39P5-202ENST00000512505 151 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNU2-69P-201ENST00000516061 100 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.15□□□□□ -2.59
CPSF1Q10570 MIR3941-201ENST00000582572 103 ntBASIC-1.15□□□□□ -2.59
CPSF1Q10570 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.16□□□□□ -2.6
CPSF1Q10570 SNORA27.1-201ENST00000362604 124 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 SNORD70.1-201ENST00000391007 85 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 AC010486.3-201ENST00000511602 785 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 MIR4677-201ENST00000584153 80 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 MIR4639-201ENST00000584938 69 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 AC008507.2-201ENST00000588402 1176 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 RNU6-85P-201ENST00000605989 107 ntBASIC-1.16□□□□□ -2.6
CPSF1Q10570 RNU6-727P-201ENST00000363592 107 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 SNORD115-8-201ENST00000363856 82 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 SNORD115-38-201ENST00000365037 82 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
CPSF1Q10570 MTCYBP4-201ENST00000401524 249 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 MTND3P9-201ENST00000429526 346 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 MIR3684-201ENST00000579779 74 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 AC134878.1-201ENST00000619901 243 ntBASIC-1.17□□□□□ -2.6
CPSF1Q10570 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 RNU6-117P-201ENST00000365415 107 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 MIR522-201ENST00000385071 87 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 AC244250.2-201ENST00000418731 148 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 AC112204.1-201ENST00000502591 103 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 MIR378D2-201ENST00000580636 98 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 MIR4791-201ENST00000607666 84 ntBASIC-1.18□□□□□ -2.6
CPSF1Q10570 RNY1P12-201ENST00000364251 105 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 RNU6-809P-201ENST00000384461 107 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.19□□□□□ -2.6
CPSF1Q10570 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.19□□□□□ -2.6
CPSF1Q10570 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC091959.1-201ENST00000495857 238 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC018710.1-201ENST00000506509 158 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 SNORA31.14-201ENST00000516728 116 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC090572.1-201ENST00000519251 160 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC105029.1-201ENST00000520250 669 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AP003181.2-201ENST00000528941 181 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 Z94722.1-201ENST00000604328 474 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC018462.2-201ENST00000605375 395 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 MIR6740-201ENST00000618268 113 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC022960.3-201ENST00000619794 441 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 AC244669.1-204ENST00000621564 178 ntBASIC-1.19□□□□□ -2.6
CPSF1Q10570 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.19□□□□□ -2.6
CPSF1Q10570 RNA5SP205-201ENST00000364653 136 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 MIR873-201ENST00000401120 77 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 MIR450B-201ENST00000401182 78 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 RNU6-855P-201ENST00000410395 104 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 FCF1P9-201ENST00000412546 282 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 RPL23AP75-201ENST00000491601 451 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 AC063944.3-201ENST00000609969 533 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 MIR6507-201ENST00000613630 70 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 AL512427.1-201ENST00000618593 349 ntBASIC-1.2□□□□□ -2.6
CPSF1Q10570 SNORD50B-201ENST00000364995 70 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 U8.17-201ENST00000391292 132 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 AL355994.1-201ENST00000424379 260 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 MTND1P14-201ENST00000427400 950 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.21□□□□□ -2.6
CPSF1Q10570 AC091144.1-201ENST00000519573 138 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 AP003168.1-201ENST00000530091 307 ntBASIC-1.21□□□□□ -2.6
CPSF1Q10570 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 SNORD38C-201ENST00000384381 69 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 MIR518F-201ENST00000384973 87 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 SNORA75.4-201ENST00000391278 119 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 AC090844.1-201ENST00000422019 156 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 MTND4LP18-201ENST00000526864 291 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 MTCO3P23-201ENST00000561363 289 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 AGGF1P4-201ENST00000568249 801 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 AP000811.1-201ENST00000603803 651 ntBASIC-1.22□□□□□ -2.6
CPSF1Q10570 AC245008.1-201ENST00000608123 476 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms