Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC022559.1-201ENST00000520905 205 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 AC091544.4-201ENST00000555268 342 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 AL929325.1-201ENST00000603096 117 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.67□□□□□ -1.98
SSRP1Q08945 RNU6-1019P-201ENST00000364424 107 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 RNU4-70P-201ENST00000384579 139 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 RNU6-1291P-201ENST00000516591 104 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 MIR4529-201ENST00000578110 78 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 MIR5094-201ENST00000578766 85 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 AC245884.12-201ENST00000615364 59 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 MIR6766-201ENST00000622641 72 ntBASIC2.66□□□□□ -1.98
SSRP1Q08945 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.65□□□□□ -1.98
SSRP1Q08945 RNU6-103P-201ENST00000363686 107 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 RNU6-682P-201ENST00000363843 106 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 Y_RNA.203-201ENST00000364106 102 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 snoU2_19.4-201ENST00000364329 80 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 Y_RNA.238-201ENST00000364441 102 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 Y_RNA.572-201ENST00000384757 98 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 MIR1261-201ENST00000408659 82 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 RNU2-2P-201ENST00000410396 191 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 Y_RNA.621-201ENST00000411065 96 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 AC233266.1-201ENST00000454518 96 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 RNA5SP281-201ENST00000516504 135 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 RNU1-104P-201ENST00000517280 175 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 AL358944.1-201ENST00000528537 144 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 RNU2-4P-201ENST00000606190 192 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 AC242852.1-201ENST00000612151 96 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 AC244015.1-201ENST00000622301 99 ntBASIC2.65□□□□□ -1.99
SSRP1Q08945 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSRP1Q08945 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSRP1Q08945 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SSRP1Q08945 Y_RNA.150-201ENST00000363562 102 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 Y_RNA.229-201ENST00000364347 113 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 RNU4-41P-201ENST00000364426 143 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 Y_RNA.267-201ENST00000364679 109 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 MIR616-201ENST00000385293 97 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 SNORA48.1-201ENST00000390879 135 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.64□□□□□ -1.99
SSRP1Q08945 AC069257.2-201ENST00000441819 155 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.64□□□□□ -1.99
SSRP1Q08945 RNU6-861P-201ENST00000516745 106 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 AL391903.3-201ENST00000612158 163 ntBASIC2.64□□□□□ -1.99
SSRP1Q08945 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSRP1Q08945 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSRP1Q08945 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SSRP1Q08945 RNU6-886P-201ENST00000384319 105 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 AL512604.1-201ENST00000404812 257 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSRP1Q08945 RNVU1-2-201ENST00000516326 135 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 AP002004.2-201ENST00000531656 154 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 AC084364.2-201ENST00000546924 395 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.63□□□□□ -1.99
SSRP1Q08945 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
SSRP1Q08945 U6.106-201ENST00000636360 105 ntBASIC2.63□□□□□ -1.99
SSRP1Q08945 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSRP1Q08945 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSRP1Q08945 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSRP1Q08945 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSRP1Q08945 RNU6-1080P-201ENST00000383982 107 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 MIR524-201ENST00000385242 87 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 RNA5SP496-201ENST00000391240 109 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 AC245047.4-201ENST00000433189 144 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 MTND2P29-201ENST00000438595 412 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 Y_RNA.662-201ENST00000516028 97 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 RNU6-1219P-201ENST00000516143 112 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.62□□□□□ -1.99
SSRP1Q08945 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 AC022217.4-201ENST00000604389 163 ntBASIC2.62□□□□□ -1.99
SSRP1Q08945 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.62□□□□□ -1.99
SSRP1Q08945 Y_RNA.180-201ENST00000363867 113 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 Y_RNA.240-201ENST00000364469 95 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 RNA5SP501-201ENST00000410990 112 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 RN7SKP101-201ENST00000411376 320 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.61□□□□□ -1.99
SSRP1Q08945 AC245047.8-201ENST00000456455 284 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.61□□□□□ -1.99
SSRP1Q08945 SCARNA8-201ENST00000515924 131 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 MIR4744-201ENST00000581563 82 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 U1.36-201ENST00000620684 176 ntBASIC2.61□□□□□ -1.99
SSRP1Q08945 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSRP1Q08945 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSRP1Q08945 SNORA1B-201ENST00000362535 133 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 Y_RNA.182-201ENST00000363880 111 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 AC245047.3-201ENST00000429428 127 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 RPS27P1-201ENST00000450552 247 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 Y_RNA.797-201ENST00000515977 94 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 RNU6-1007P-201ENST00000516586 107 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 RNU6-453P-201ENST00000516819 85 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms