Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU5E-7P-201ENST00000365290 117 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-2.32□□□□□ -2.78
TFF3Q07654 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-2.32□□□□□ -2.78
TFF3Q07654 RNU6-1165P-201ENST00000410119 107 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 AL031274.1-201ENST00000450334 232 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 AP003072.1-201ENST00000531740 145 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 MIR15A-201ENST00000607334 83 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 TCL6_2.1-201ENST00000615162 119 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 U6.42-201ENST00000618440 107 ntBASIC-2.32□□□□□ -2.78
TFF3Q07654 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 RNU6-312P-201ENST00000364629 107 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 Y_RNA.267-201ENST00000364679 109 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 SNORD24-201ENST00000383884 75 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 MIR217-201ENST00000384817 110 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 MIR588-201ENST00000384900 83 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 MT-TF-201ENST00000387314 71 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 SNORD28B-201ENST00000390993 75 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-2.33□□□□□ -2.78
TFF3Q07654 RNU6-64P-201ENST00000517119 105 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-2.33□□□□□ -2.78
TFF3Q07654 MIR4438-201ENST00000585271 93 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 AC008873.1-201ENST00000625051 138 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 U4.7-201ENST00000638126 106 ntBASIC-2.33□□□□□ -2.78
TFF3Q07654 MIR335-201ENST00000362173 94 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 RNA5SP93-201ENST00000362525 114 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 U3.4-201ENST00000363352 213 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 RNU6-291P-201ENST00000384720 107 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-2.34□□□□□ -2.78
TFF3Q07654 AC002542.1-201ENST00000440683 193 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 UQCRBP2-201ENST00000447827 297 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 MTCO3P38-201ENST00000468910 766 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 AC119751.4-201ENST00000507498 357 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 RNU6-677P-201ENST00000516914 101 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 RNU6-765P-201ENST00000516916 99 ntBASIC-2.34□□□□□ -2.78
TFF3Q07654 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-2.34□□□□□ -2.78
TFF3Q07654 RNU6-740P-201ENST00000364734 105 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 RNU6-1001P-201ENST00000411265 100 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 MTCO3P17-201ENST00000443775 513 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 MRPS10P1-201ENST00000448483 130 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 SNRPGP7-201ENST00000469016 106 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 MIR5006-201ENST00000583027 110 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 AF250324.2-201ENST00000608299 610 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 AC016252.1-201ENST00000609721 474 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 AL139418.1-201ENST00000613613 177 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-2.35□□□□□ -2.79
TFF3Q07654 MIR518F-201ENST00000384973 87 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 RNU4-83P-201ENST00000410863 133 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 AC004386.2-201ENST00000441858 148 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 HGF-207ENST00000453018 721 ntTSL 3 BASIC-2.36□□□□□ -2.79
TFF3Q07654 snoU13.13-201ENST00000458842 104 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 RNU7-55P-201ENST00000459426 62 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.36□□□□□ -2.79
TFF3Q07654 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-2.36□□□□□ -2.79
TFF3Q07654 AC174048.1-201ENST00000603389 144 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 MTND1P7-201ENST00000632801 297 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 AC091948.2-201ENST00000636510 279 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 Z97988.1-201ENST00000637697 135 ntBASIC-2.36□□□□□ -2.79
TFF3Q07654 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-2.37□□□□□ -2.79
TFF3Q07654 RNU6-252P-201ENST00000363232 107 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 U8.17-201ENST00000391292 132 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 RNU5E-9P-201ENST00000411164 104 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 RNY4-201ENST00000516507 96 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 RNU6-175P-201ENST00000516896 107 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 POLR3GP1-201ENST00000594073 261 ntBASIC-2.37□□□□□ -2.79
TFF3Q07654 SNORD41.1-201ENST00000391000 69 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 MIR889-201ENST00000401280 79 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 MTATP6P17-201ENST00000431030 672 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 AC108059.2-201ENST00000434626 151 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 AC006435.5-201ENST00000624486 112 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 AL078596.1-201ENST00000624856 447 ntBASIC-2.38□□□□□ -2.79
TFF3Q07654 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 RNU6-1029P-201ENST00000384109 107 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-2.39□□□□□ -2.79
TFF3Q07654 AC109479.2-201ENST00000517842 174 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 FRG2DP-202ENST00000566967 323 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 MIR4762-201ENST00000585261 75 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 AC078880.5-201ENST00000617845 421 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-2.39□□□□□ -2.79
TFF3Q07654 SNORD114-17-201ENST00000364699 75 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 SNORD114-29-201ENST00000364819 70 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 RNU6-692P-201ENST00000384496 107 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 MTCO3P19-201ENST00000415864 321 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 AC012306.1-201ENST00000423267 114 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 GMFBP1-201ENST00000467831 427 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 SERF1AP1-201ENST00000514575 187 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 AC133794.1-201ENST00000602731 914 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 AL445523.1-201ENST00000451184 1362 ntBASIC-2.4□□□□□ -2.79
TFF3Q07654 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.41□□□□□ -2.8
TFF3Q07654 RNY3P14-201ENST00000384309 102 ntBASIC-2.41□□□□□ -2.8
TFF3Q07654 RNU6-1093P-201ENST00000391194 107 ntBASIC-2.41□□□□□ -2.8
TFF3Q07654 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.41□□□□□ -2.8
TFF3Q07654 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-2.41□□□□□ -2.8
TFF3Q07654 RNU6-1178P-201ENST00000516674 107 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms