Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA25.7-201ENST00000364375 127 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 SNORD50B-201ENST00000364995 70 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 RNU6-74P-201ENST00000384235 107 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 MIR215-201ENST00000384858 110 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 AC093303.1-201ENST00000514549 295 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 SCOCP1-201ENST00000554676 349 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 U2.17-201ENST00000611454 95 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 SNORD115-32-201ENST00000364079 82 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 RNU6-35P-201ENST00000384530 107 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 SNORD28-201ENST00000384706 75 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 RNU4-63P-201ENST00000411313 118 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AC104850.1-201ENST00000435940 476 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AC010486.3-201ENST00000511602 785 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AC006600.1-201ENST00000572529 153 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AC064836.2-201ENST00000609491 462 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 uc_338.28-201ENST00000612082 187 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 AL158209.2-201ENST00000619266 216 ntBASIC-1.04□□□□□ -2.58
HIST1H1AQ02539 RNU4-92P-201ENST00000363783 136 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 SNORA75.1-201ENST00000391130 148 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 MIR1265-201ENST00000408444 86 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AL354751.2-201ENST00000415471 210 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 MTCO2P21-201ENST00000419780 677 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 GPR143P-201ENST00000434155 205 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AC109327.2-201ENST00000448339 378 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 MIR4436A-201ENST00000585278 85 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AL133173.2-201ENST00000614270 90 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 AC099654.13-201ENST00000639774 207 ntBASIC-1.05□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 RNU6-811P-201ENST00000384069 107 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 SNORD38C-201ENST00000384381 69 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 U8.17-201ENST00000391292 132 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 MIR873-201ENST00000401120 77 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 AL008987.1-201ENST00000415528 237 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 AC073464.1-201ENST00000429823 534 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 Vault.3-201ENST00000516676 95 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 NAMPTP3-201ENST00000569273 224 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 U7.6-201ENST00000610841 64 ntBASIC-1.06□□□□□ -2.58
HIST1H1AQ02539 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 MTCO2P27-201ENST00000420740 428 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 SNRPGP10-201ENST00000432323 225 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 AL512286.1-201ENST00000439244 400 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 SNORA31.14-201ENST00000516728 116 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 MIR4639-201ENST00000584938 69 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 AL136370.1-201ENST00000608166 691 ntBASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.07□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 RNU6-606P-201ENST00000384721 111 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 MIR518F-201ENST00000384973 87 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 RNU6-830P-201ENST00000516353 107 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 MIR4677-201ENST00000584153 80 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 AL590491.3-201ENST00000610731 82 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 MIR8066-201ENST00000617280 78 ntBASIC-1.08□□□□□ -2.58
HIST1H1AQ02539 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 MIR655-201ENST00000362159 97 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 RNU6-108P-201ENST00000365558 107 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 MIR563-201ENST00000385080 79 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 MIR153-2-201ENST00000385225 87 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 RNU6-855P-201ENST00000410395 104 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AC022878.1-201ENST00000530684 149 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AC138749.4-201ENST00000563970 127 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 MIR5706-201ENST00000579841 80 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 PIGPP4-201ENST00000584447 307 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AC087685.1-201ENST00000587507 141 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AL607023.1-201ENST00000620045 248 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AC244669.1-204ENST00000621564 178 ntBASIC-1.09□□□□□ -2.58
HIST1H1AQ02539 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 RNU6-501P-201ENST00000364072 100 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 MIR588-201ENST00000384900 83 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 MIR521-1-201ENST00000384902 87 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 RNU6-159P-201ENST00000391080 106 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 RNU6-131P-201ENST00000391144 107 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 RNA5SP25-201ENST00000410815 110 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms