Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-847P-201ENST00000411115 108 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 MTCO2P3-201ENST00000442543 421 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.74□□□□□ -2.53
PRKDCP78527 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
PRKDCP78527 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-187P-201ENST00000384139 106 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 SNORA24.1-201ENST00000384401 135 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 U8.15-201ENST00000390947 134 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.74□□□□□ -2.53
PRKDCP78527 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 snoU13.16-201ENST00000459350 104 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU7-51P-201ENST00000516560 62 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 snoU83B.1-201ENST00000517136 88 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AC068587.5-201ENST00000528506 175 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.74□□□□□ -2.53
PRKDCP78527 AL355375.2-201ENST00000574825 175 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.74□□□□□ -2.53
PRKDCP78527 SCARNA4-201ENST00000629045 128 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-541P-201ENST00000384709 110 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.74□□□□□ -2.53
PRKDCP78527 AF186996.7-201ENST00000492781 209 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AC091133.4-201ENST00000511142 308 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.74□□□□□ -2.53
PRKDCP78527 AC091965.4-201ENST00000607691 587 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.74□□□□□ -2.53
PRKDCP78527 Z97988.1-201ENST00000637697 135 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 SNORA1.2-201ENST00000365189 134 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 SNRPGP14-201ENST00000435400 219 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 MTCO3P38-201ENST00000468910 766 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 RNU6-504P-201ENST00000516568 104 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 POLR3GP2-201ENST00000588366 668 ntBASIC-0.74□□□□□ -2.53
PRKDCP78527 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-511P-201ENST00000363496 107 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-353P-201ENST00000364266 108 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.75□□□□□ -2.53
PRKDCP78527 MIR3912-201ENST00000577566 105 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-88P-201ENST00000606801 100 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC063944.3-201ENST00000609969 533 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC103706.2-201ENST00000638080 240 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC013437.2-201ENST00000639587 677 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC114491.1-201ENST00000416095 246 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 SUMO1P2-201ENST00000452524 304 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNA5SP54-201ENST00000516951 92 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC018865.2-201ENST00000423631 129 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.75□□□□□ -2.53
PRKDCP78527 GMFBP1-201ENST00000467831 427 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-118P-201ENST00000516552 102 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 MIR3179-1-201ENST00000578940 84 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 MIR3179-2-201ENST00000579107 84 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 MIR3179-3-201ENST00000579566 84 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC020891.4-201ENST00000605745 93 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 AC023158.2-201ENST00000614876 543 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 MIR3179-4-201ENST00000617599 84 ntBASIC-0.75□□□□□ -2.53
PRKDCP78527 RNU6-641P-201ENST00000384006 107 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-540P-201ENST00000384622 101 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.76□□□□□ -2.53
PRKDCP78527 TPTE2P1-204ENST00000435256 593 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AC131281.1-201ENST00000522984 164 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AGGF1P4-201ENST00000568249 801 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-384P-201ENST00000364900 104 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-190P-201ENST00000384154 102 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-784P-201ENST00000384330 106 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 MTCYBP4-201ENST00000401524 249 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 MTND2P20-201ENST00000440805 661 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AC005178.1-201ENST00000508392 440 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 MTND3P25-201ENST00000509243 135 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-323P-201ENST00000521915 107 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AL596211.1-201ENST00000569873 2277 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 CALM2P2-201ENST00000428512 440 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AL138752.1-201ENST00000452964 351 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 AP003072.1-201ENST00000531740 145 ntBASIC-0.76□□□□□ -2.53
PRKDCP78527 SNORD115-42-201ENST00000364273 82 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 MIR516B1-201ENST00000385211 90 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 U8.17-201ENST00000391292 132 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.77□□□□□ -2.53
PRKDCP78527 MTND1P32-201ENST00000433043 938 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AC026421.1-201ENST00000519101 163 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AC139792.3-201ENST00000623525 224 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 RNU6-502P-201ENST00000362419 108 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 RNU6-509P-201ENST00000363519 107 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 SNORD2-201ENST00000459163 69 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 RNU7-140P-201ENST00000459546 60 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.77□□□□□ -2.53
PRKDCP78527 PRDX4P1-201ENST00000507189 574 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 DEFB131E-202ENST00000602581 683 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms