Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 UBE2V1P7-201ENST00000446395 340 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 AC107399.1-201ENST00000451226 265 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.7□□□□□ -2.3
CCNA1P78396 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 MIR410-201ENST00000362222 80 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 Y_RNA.404-201ENST00000383978 102 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 MIR520G-201ENST00000385064 90 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 RNU6-510P-201ENST00000391239 108 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 MTND3P8-201ENST00000412909 339 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.69□□□□□ -2.3
CCNA1P78396 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
CCNA1P78396 AC069439.1-201ENST00000494739 167 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 RNU6-496P-201ENST00000516145 99 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.69□□□□□ -2.3
CCNA1P78396 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.69□□□□□ -2.3
CCNA1P78396 AL096861.1-201ENST00000610899 123 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.69□□□□□ -2.3
CCNA1P78396 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
CCNA1P78396 Y_RNA.88-201ENST00000363029 99 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 SNORD12B-201ENST00000410433 91 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RNA5SP475-201ENST00000410568 110 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.68□□□□□ -2.3
CCNA1P78396 PIGPP3-201ENST00000425307 415 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RPL23AP50-201ENST00000434149 455 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.68□□□□□ -2.3
CCNA1P78396 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.68□□□□□ -2.3
CCNA1P78396 LINC01399-202ENST00000458450 244 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 AL049830.1-201ENST00000468034 425 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RPS26P48-201ENST00000491713 339 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 AC023442.1-201ENST00000531247 422 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 AC005828.6-201ENST00000606610 232 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 AC084782.3-201ENST00000612282 578 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 MIR5087-201ENST00000635826 76 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 MIR924-201ENST00000638017 53 ntBASIC0.68□□□□□ -2.3
CCNA1P78396 RNU6-1301P-201ENST00000362724 104 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 Z98949.2-201ENST00000440996 144 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 RPEP5-201ENST00000441137 268 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 ELOCP24-201ENST00000456370 334 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 AC011352.1-201ENST00000512300 793 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 RNU6-1213P-201ENST00000517075 94 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 AC060780.3-201ENST00000589464 80 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 AC120024.3-201ENST00000603167 156 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 PISRT1.1-201ENST00000616930 107 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 AC092794.2-201ENST00000620933 563 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 AL008636.1-201ENST00000625038 1018 ntBASIC0.67□□□□□ -2.3
CCNA1P78396 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
CCNA1P78396 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 SNORD68-201ENST00000363214 84 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 RNU4-40P-201ENST00000364351 143 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 Y_RNA.339-201ENST00000365325 102 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 RNU6-163P-201ENST00000384396 106 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 SNORD116-13-201ENST00000384408 92 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 MIR891A-201ENST00000401237 79 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.66□□□□□ -2.3
CCNA1P78396 Y_RNA.621-201ENST00000411065 96 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AL354751.2-201ENST00000415471 210 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 RPS26P5-201ENST00000418544 335 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.66□□□□□ -2.3
CCNA1P78396 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.66□□□□□ -2.3
CCNA1P78396 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
CCNA1P78396 CYCTP-201ENST00000504253 315 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AF235103.2-201ENST00000525753 346 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AC004832.4-201ENST00000608952 331 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AC007014.2-201ENST00000615581 479 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AC002553.4-201ENST00000616896 331 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 AC073869.6-201ENST00000640656 341 ntBASIC0.66□□□□□ -2.3
CCNA1P78396 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCNA1P78396 RNA5SP457-201ENST00000363657 124 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 RNU6-99P-201ENST00000364721 107 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 Y_RNA.482-201ENST00000384377 111 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.65□□□□□ -2.31
CCNA1P78396 AC245047.8-201ENST00000456455 284 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 snoU13.25-201ENST00000458945 104 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 MTND4P17-201ENST00000470444 350 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.65□□□□□ -2.31
CCNA1P78396 RNU6-408P-201ENST00000515910 100 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 RNU6-120P-201ENST00000516077 103 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.65□□□□□ -2.31
CCNA1P78396 AL669831.3-213ENST00000636676 183 ntBASIC0.65□□□□□ -2.31
CCNA1P78396 Y_RNA.6-201ENST00000362350 114 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 SNORD115-30-201ENST00000364117 82 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 Y_RNA.243-201ENST00000364481 109 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 Y_RNA.336-201ENST00000365307 109 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 RNU6-926P-201ENST00000384075 107 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 SNORA75.4-201ENST00000391278 119 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 RNA5SP511-201ENST00000410487 115 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms