Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.1□□□□□ -2.59
UBA52P62987 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.1□□□□□ -2.59
UBA52P62987 U7.6-201ENST00000610841 64 ntBASIC-1.1□□□□□ -2.59
UBA52P62987 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.1□□□□□ -2.59
UBA52P62987 AC022418.1-201ENST00000624118 445 ntBASIC-1.1□□□□□ -2.59
UBA52P62987 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.1□□□□□ -2.59
UBA52P62987 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.11□□□□□ -2.59
UBA52P62987 RNU6-227P-201ENST00000362865 103 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 RNU6-179P-201ENST00000363350 107 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 MIR548L-201ENST00000408303 86 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 MTND4P3-201ENST00000417829 541 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 AC107297.1-201ENST00000459991 176 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 MTCO2P29-201ENST00000465212 189 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 RNU6-612P-201ENST00000516909 102 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 RNA5SP169-201ENST00000517268 117 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 MIR378F-201ENST00000578143 78 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 AC002044.1-201ENST00000606707 158 ntBASIC-1.11□□□□□ -2.59
UBA52P62987 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 MIR522-201ENST00000385071 87 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.12□□□□□ -2.59
UBA52P62987 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.12□□□□□ -2.59
UBA52P62987 RNU6-329P-201ENST00000459618 107 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 AC018710.1-201ENST00000506509 158 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.12□□□□□ -2.59
UBA52P62987 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.12□□□□□ -2.59
UBA52P62987 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.12□□□□□ -2.59
UBA52P62987 AC022306.2-201ENST00000617563 647 ntBASIC-1.12□□□□□ -2.59
UBA52P62987 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 SNORA27.1-201ENST00000362604 124 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 MIR196A1-201ENST00000388006 70 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 SNORA75.4-201ENST00000391278 119 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 MTCO2P3-201ENST00000442543 421 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 HMGN2P32-201ENST00000444648 269 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.13□□□□□ -2.59
UBA52P62987 RNU6-334P-201ENST00000517072 102 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 RNA5SP66-201ENST00000517178 101 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.13□□□□□ -2.59
UBA52P62987 FGF7P1-201ENST00000582820 288 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 AC018462.2-201ENST00000605375 395 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 MIR4791-201ENST00000607666 84 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 AL162376.1-201ENST00000624117 175 ntBASIC-1.13□□□□□ -2.59
UBA52P62987 SNORD115-8-201ENST00000363856 82 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 RNU6-266P-201ENST00000364225 107 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 RNU6-740P-201ENST00000364734 105 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 SNORD115-38-201ENST00000365037 82 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 SNORA1-201ENST00000384107 130 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 AC137499.1-201ENST00000427602 88 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 SNRPGP10-201ENST00000432323 225 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 AL138752.1-201ENST00000452964 351 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 SCARNA18-201ENST00000459004 134 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 RNU2-13P-201ENST00000515909 113 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 AC013437.2-201ENST00000639587 677 ntBASIC-1.14□□□□□ -2.59
UBA52P62987 RNU6-407P-201ENST00000365280 104 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 MTCO2P27-201ENST00000420740 428 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 SPINT5P-201ENST00000448174 155 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 RNU2-69P-201ENST00000516061 100 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 AC091144.1-201ENST00000519573 138 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 MTND2P32-201ENST00000521584 1038 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 MTATP6P15-201ENST00000527233 835 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 AGGF1P4-201ENST00000568249 801 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 U4.2-201ENST00000618561 85 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 AC023510.2-201ENST00000622162 746 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 AC068137.4-201ENST00000638485 296 ntBASIC-1.15□□□□□ -2.59
UBA52P62987 RNU6-727P-201ENST00000363592 107 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 SNORD50B-201ENST00000364995 70 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 SNORA22B-201ENST00000383876 138 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 MIR518F-201ENST00000384973 87 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 SNORD83B-201ENST00000386745 93 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.16□□□□□ -2.6
UBA52P62987 AC091179.3-201ENST00000474761 144 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 RNU6-475P-201ENST00000516073 104 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 AC105029.1-201ENST00000520250 669 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 AC022784.5-201ENST00000522241 437 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 MTCO3P23-201ENST00000561363 289 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 AC069431.2-201ENST00000604149 1099 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 AP001330.5-201ENST00000607176 411 ntBASIC-1.16□□□□□ -2.6
UBA52P62987 MIR30D-201ENST00000362283 70 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 RNA5SP192-201ENST00000364404 120 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 U8.6-201ENST00000364939 135 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 MIR588-201ENST00000384900 83 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 AC010587.1-201ENST00000505809 469 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.17□□□□□ -2.6
UBA52P62987 RNU6-830P-201ENST00000516353 107 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 RNA5SP54-201ENST00000516951 92 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 AL157687.1-201ENST00000554853 619 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 MIR3165-201ENST00000579874 75 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 AC010205.1-201ENST00000616668 449 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms