Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR3658-201ENST00000636291 56 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLRN1P58418 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLRN1P58418 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLRN1P58418 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLRN1P58418 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
CLRN1P58418 RNU6-704P-201ENST00000364162 103 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 Y_RNA.215-201ENST00000364204 112 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 RNU4-43P-201ENST00000410628 137 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 AC023449.1-201ENST00000454464 154 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.28□□□□□ -2.04
CLRN1P58418 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 AC005786.1-201ENST00000588553 154 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 DNAJC19P2-201ENST00000593340 302 ntBASIC2.28□□□□□ -2.04
CLRN1P58418 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CLRN1P58418 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLRN1P58418 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLRN1P58418 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLRN1P58418 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 Y_RNA.488-201ENST00000384403 102 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 SNORA19-201ENST00000384737 128 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 MIR196B-201ENST00000384852 84 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 MIR562-201ENST00000384894 95 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 MIR597-201ENST00000384968 97 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 RNU11-3P-201ENST00000391111 133 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 SNORA79-201ENST00000408376 140 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 SNORA11.4-201ENST00000408823 129 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 RNU2-52P-201ENST00000410680 190 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 TMSB4XP3-201ENST00000445144 114 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 HMGN1P7-201ENST00000491722 313 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.27□□□□□ -2.05
CLRN1P58418 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
CLRN1P58418 U2.22-201ENST00000636441 106 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
CLRN1P58418 ZNF702P-202ENST00000434269 1966 ntBASIC2.27□□□□□ -2.05
CLRN1P58418 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
CLRN1P58418 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLRN1P58418 SNORA1B-201ENST00000362535 133 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 Y_RNA.253-201ENST00000364562 112 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RNU4-11P-201ENST00000365287 132 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 SNORD50.2-201ENST00000365465 70 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RNU6-484P-201ENST00000384016 107 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 Y_RNA.432-201ENST00000384087 111 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RNU2-55P-201ENST00000411146 174 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RNU7-94P-201ENST00000459576 63 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.26□□□□□ -2.05
CLRN1P58418 SNORD77.4-201ENST00000516158 81 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RNU6-1299P-201ENST00000516316 100 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 AL358944.1-201ENST00000528537 144 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 EIF4BP1-201ENST00000554881 351 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 MIR5194-201ENST00000582634 120 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 RPL12P50-201ENST00000603116 116 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.26□□□□□ -2.05
CLRN1P58418 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CLRN1P58418 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLRN1P58418 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLRN1P58418 Y_RNA.343-201ENST00000365354 112 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 Y_RNA.521-201ENST00000384560 114 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 RNU6-131P-201ENST00000391144 107 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 SNRPGP10-201ENST00000432323 225 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 AL606517.2-201ENST00000442855 241 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 RNU6-197P-201ENST00000516680 100 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 SNORA31.15-201ENST00000516771 132 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 MIR4319-201ENST00000577285 85 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 AC022217.4-201ENST00000604389 163 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 AP001485.1-201ENST00000604799 199 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 Pinc.1-201ENST00000616452 154 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 AL355596.1-201ENST00000565399 3996 ntBASIC2.25□□□□□ -2.05
CLRN1P58418 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.25□□□□□ -2.05
CLRN1P58418 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLRN1P58418 SNORA5B-201ENST00000363786 132 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 SNORA80A-201ENST00000363922 136 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 DEFA7P-201ENST00000382676 285 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 RNU6-768P-201ENST00000384683 107 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 MIR518A2-201ENST00000384966 87 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 SNORA12.1-201ENST00000390873 148 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 HMGN2P3-201ENST00000433603 273 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 HMGN2P5-201ENST00000436882 273 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 AL049830.1-201ENST00000468034 425 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 NDUFA4P2-201ENST00000489989 244 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 RNU7-149P-201ENST00000516739 59 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 AP002004.2-201ENST00000531656 154 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 MIR5094-201ENST00000578766 85 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 MIR548X2-201ENST00000579776 100 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 MIR378D2-201ENST00000580636 98 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 AL591926.4-201ENST00000616895 298 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.24□□□□□ -2.05
CLRN1P58418 AC132825.6-201ENST00000638861 357 ntBASIC2.24□□□□□ -2.05
CLRN1P58418 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLRN1P58418 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLRN1P58418 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CLRN1P58418 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLRN1P58418 MIR126-201ENST00000362291 85 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNU6-199P-201ENST00000362954 107 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 Y_RNA.497-201ENST00000384447 98 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 MIR569-201ENST00000385228 96 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms