Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MTND3P12-201ENST00000559068 328 ntBASIC0.3□□□□□ -2.36
CLDN18P56856 U8.5-201ENST00000364528 136 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 Y_RNA.364-201ENST00000365532 101 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 MIR1827-201ENST00000408549 66 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 RNU2-66P-201ENST00000410650 161 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 USP9YP30-201ENST00000430729 455 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 SNORD45.4-201ENST00000516629 73 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN18P56856 AC012433.1-201ENST00000588916 398 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 Z99129.1-201ENST00000612510 255 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 MIR6128-201ENST00000615528 109 ntBASIC0.29□□□□□ -2.36
CLDN18P56856 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CLDN18P56856 RNU6-454P-201ENST00000364292 107 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 AC117470.1-201ENST00000381974 330 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 RNY1P8-201ENST00000383970 114 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 RNU6-1310P-201ENST00000384153 107 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 RNU6-908P-201ENST00000410160 94 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 SNORD123-201ENST00000459473 70 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 AC019235.1-201ENST00000503847 207 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 AL355073.2-201ENST00000612106 557 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.28□□□□□ -2.36
CLDN18P56856 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
CLDN18P56856 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.28□□□□□ -2.36
CLDN18P56856 MIR410-201ENST00000362222 80 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 Y_RNA.38-201ENST00000362617 102 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 RNU6-654P-201ENST00000364373 107 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 snoU2-30.1-201ENST00000365012 70 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.27□□□□□ -2.37
CLDN18P56856 AC010486.3-201ENST00000511602 785 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.27□□□□□ -2.37
CLDN18P56856 MIR4762-201ENST00000585261 75 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 MIR3942-201ENST00000585264 109 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 AC104695.3-201ENST00000604052 296 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 AC005828.6-201ENST00000606610 232 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 AF250324.2-201ENST00000608299 610 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
CLDN18P56856 SNORD114-7-201ENST00000362520 77 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 RNY3P3-201ENST00000363816 102 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 Y_RNA.557-201ENST00000384680 107 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 RNA5SP95-201ENST00000410319 137 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 MTND1P4-201ENST00000435196 415 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 SNORA40.9-201ENST00000515895 93 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 RNU6-1337P-201ENST00000516525 95 ntBASIC0.26□□□□□ -2.37
CLDN18P56856 RNU6-451P-201ENST00000362921 107 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 RNY1P16-201ENST00000363063 111 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 Y_RNA.243-201ENST00000364481 109 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 RNU6-1013P-201ENST00000384180 107 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 RNU2-70P-201ENST00000410718 179 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.25□□□□□ -2.37
CLDN18P56856 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
CLDN18P56856 HMGN2P32-201ENST00000444648 269 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.25□□□□□ -2.37
CLDN18P56856 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.25□□□□□ -2.37
CLDN18P56856 Y_RNA.714-201ENST00000517065 90 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
CLDN18P56856 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.25□□□□□ -2.37
CLDN18P56856 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
CLDN18P56856 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 RNU6-842P-201ENST00000384269 107 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 RNU6-131P-201ENST00000391144 107 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 AC009161.1-201ENST00000417306 376 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.24□□□□□ -2.37
CLDN18P56856 MTND1P26-201ENST00000440488 538 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.24□□□□□ -2.37
CLDN18P56856 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.24□□□□□ -2.37
CLDN18P56856 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 MIR2115-201ENST00000516657 100 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 MIR3662-201ENST00000637030 95 ntBASIC0.24□□□□□ -2.37
CLDN18P56856 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 Y_RNA.253-201ENST00000364562 112 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 MIR522-201ENST00000385071 87 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 RNU6-373P-201ENST00000411247 98 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 AC022616.4-201ENST00000522985 181 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.23□□□□□ -2.37
CLDN18P56856 AC006380.1-201ENST00000603598 186 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 AC091925.1-201ENST00000623204 462 ntBASIC0.23□□□□□ -2.37
CLDN18P56856 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.23□□□□□ -2.37
CLDN18P56856 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.22□□□□□ -2.37
CLDN18P56856 Y_RNA.2-201ENST00000362330 96 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 Y_RNA.148-201ENST00000363557 117 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 Y_RNA.358-201ENST00000365491 99 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 AL139396.1-201ENST00000421137 167 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.22□□□□□ -2.37
CLDN18P56856 AL392103.1-201ENST00000447000 198 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.22□□□□□ -2.37
CLDN18P56856 RNU6-864P-201ENST00000516256 108 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 AC015726.2-201ENST00000620112 122 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 MIR1321-201ENST00000637766 79 ntBASIC0.22□□□□□ -2.37
CLDN18P56856 RNU6-396P-201ENST00000365369 105 ntBASIC0.21□□□□□ -2.38
CLDN18P56856 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
CLDN18P56856 SNORD12B-201ENST00000410433 91 ntBASIC0.21□□□□□ -2.38
CLDN18P56856 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms