Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 AL591926.4-201ENST00000616895 298 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.36□□□□□ -2.35
CLDN6P56747 Y_RNA.48-201ENST00000362710 103 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNU6-451P-201ENST00000362921 107 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 U8.5-201ENST00000364528 136 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNU4-67P-201ENST00000364569 141 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNU6-1145P-201ENST00000384246 107 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 MIR15B-201ENST00000385045 98 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNA5SP475-201ENST00000410568 110 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AL354751.2-201ENST00000415471 210 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN6P56747 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.35□□□□□ -2.35
CLDN6P56747 SUMO1P2-201ENST00000452524 304 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AC010486.3-201ENST00000511602 785 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 RNA5SP395-201ENST00000516567 118 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AF235103.2-201ENST00000525753 346 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN6P56747 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.35□□□□□ -2.35
CLDN6P56747 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN6P56747 MIR3942-201ENST00000585264 109 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AC005828.6-201ENST00000606610 232 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 Z99129.1-201ENST00000612510 255 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 MIR3674-201ENST00000636576 68 ntBASIC0.35□□□□□ -2.35
CLDN6P56747 MIR410-201ENST00000362222 80 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNY3P3-201ENST00000363816 102 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNU6-879P-201ENST00000364328 108 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.34□□□□□ -2.36
CLDN6P56747 DLGAP5P1-201ENST00000430307 464 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNU6-625P-201ENST00000459412 107 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNU7-43P-201ENST00000516554 64 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNU1-54P-201ENST00000517181 120 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 AC093027.1-201ENST00000546698 429 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
CLDN6P56747 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
CLDN6P56747 RNU6-454P-201ENST00000364292 107 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 SNORD105-201ENST00000386910 85 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 MIR190B-201ENST00000401119 79 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 RNU7-87P-201ENST00000459343 62 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 RN7SKP12-201ENST00000516275 143 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 MTND3P12-201ENST00000559068 328 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 MIR4762-201ENST00000585261 75 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.33□□□□□ -2.36
CLDN6P56747 AC100810.6-201ENST00000638068 285 ntBASIC0.33□□□□□ -2.36
CLDN6P56747 Y_RNA.38-201ENST00000362617 102 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 SNORD113.3-201ENST00000364630 78 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 Y_RNA.364-201ENST00000365532 101 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 AC117470.1-201ENST00000381974 330 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 MIR1827-201ENST00000408549 66 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 RNU6-1304P-201ENST00000411374 106 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 AL390729.2-201ENST00000416137 156 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN6P56747 USP9YP30-201ENST00000430729 455 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 MTND1P26-201ENST00000440488 538 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
CLDN6P56747 SNORD114-7-201ENST00000362520 77 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 RNU6-654P-201ENST00000364373 107 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 RNU6-842P-201ENST00000384269 107 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 MRPS18CP6-201ENST00000423587 223 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 UBE2V1P7-201ENST00000446395 340 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 HMGN1P10-201ENST00000474557 553 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 AF250324.2-201ENST00000608299 610 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 MIR6128-201ENST00000615528 109 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
CLDN6P56747 RNU6-1084P-201ENST00000362498 107 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 Y_RNA.294-201ENST00000364916 102 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 SNORA2B-201ENST00000384583 137 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 RNU6-700P-201ENST00000391043 107 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 MLLT10P1-201ENST00000418346 262 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 HAR1A.1-201ENST00000459583 118 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.3□□□□□ -2.36
CLDN6P56747 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CLDN6P56747 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.3□□□□□ -2.36
CLDN6P56747 MIR1-1-201ENST00000362147 71 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 RNY1P16-201ENST00000363063 111 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 Y_RNA.243-201ENST00000364481 109 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 Y_RNA.557-201ENST00000384680 107 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.29□□□□□ -2.36
CLDN6P56747 SNORD123-201ENST00000459473 70 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 SNORA40.9-201ENST00000515895 93 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 RNU6-1337P-201ENST00000516525 95 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 SNORD45.4-201ENST00000516629 73 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 MIR5701-3-201ENST00000578890 82 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 MIR5701-1-201ENST00000585138 82 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 MIR5701-2-201ENST00000615634 82 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms