Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
CDH12P55289 RNU6-847P-201ENST00000411115 108 ntBASIC1.86□□□□□ -2.11
CDH12P55289 AL356320.1-201ENST00000429616 163 ntBASIC1.86□□□□□ -2.11
CDH12P55289 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH12P55289 RNU6-1096P-201ENST00000517089 102 ntBASIC1.86□□□□□ -2.11
CDH12P55289 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
CDH12P55289 AC127455.1-201ENST00000565496 145 ntBASIC1.86□□□□□ -2.11
CDH12P55289 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH12P55289 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDH12P55289 Y_RNA.304-201ENST00000365011 112 ntBASIC1.85□□□□□ -2.11
CDH12P55289 Y_RNA.515-201ENST00000384535 112 ntBASIC1.85□□□□□ -2.11
CDH12P55289 RNA5SP109-201ENST00000391010 116 ntBASIC1.85□□□□□ -2.11
CDH12P55289 MIR1298-201ENST00000408783 112 ntBASIC1.85□□□□□ -2.11
CDH12P55289 SNORA36B-201ENST00000410438 131 ntBASIC1.85□□□□□ -2.11
CDH12P55289 Y_RNA.626-201ENST00000411288 95 ntBASIC1.85□□□□□ -2.11
CDH12P55289 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.85□□□□□ -2.11
CDH12P55289 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
CDH12P55289 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.85□□□□□ -2.11
CDH12P55289 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
CDH12P55289 AL365265.1-201ENST00000621045 234 ntBASIC1.85□□□□□ -2.11
CDH12P55289 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH12P55289 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH12P55289 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH12P55289 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDH12P55289 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDH12P55289 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH12P55289 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDH12P55289 RNU6-653P-201ENST00000363074 106 ntBASIC1.84□□□□□ -2.11
CDH12P55289 RNU6-1205P-201ENST00000363625 106 ntBASIC1.84□□□□□ -2.11
CDH12P55289 Y_RNA.200-201ENST00000364018 102 ntBASIC1.84□□□□□ -2.11
CDH12P55289 RNU4-10P-201ENST00000364383 140 ntBASIC1.84□□□□□ -2.11
CDH12P55289 Y_RNA.274-201ENST00000364714 101 ntBASIC1.84□□□□□ -2.11
CDH12P55289 SNORA72-201ENST00000384339 132 ntBASIC1.84□□□□□ -2.11
CDH12P55289 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
CDH12P55289 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
CDH12P55289 MIR520G-201ENST00000385064 90 ntBASIC1.84□□□□□ -2.11
CDH12P55289 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH12P55289 RPL23AP54-201ENST00000495129 419 ntBASIC1.84□□□□□ -2.11
CDH12P55289 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH12P55289 AC008413.1-201ENST00000511864 177 ntBASIC1.84□□□□□ -2.11
CDH12P55289 RNY3P16-201ENST00000516338 101 ntBASIC1.84□□□□□ -2.11
CDH12P55289 RNU7-116P-201ENST00000516940 62 ntBASIC1.84□□□□□ -2.11
CDH12P55289 RNU6-341P-201ENST00000516973 96 ntBASIC1.84□□□□□ -2.11
CDH12P55289 AC011604.1-201ENST00000545978 196 ntBASIC1.84□□□□□ -2.11
CDH12P55289 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH12P55289 AL929325.1-201ENST00000603096 117 ntBASIC1.84□□□□□ -2.11
CDH12P55289 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
CDH12P55289 AC100821.1-201ENST00000523153 2479 ntBASIC1.84□□□□□ -2.12
CDH12P55289 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
CDH12P55289 AP006437.1-201ENST00000641440 3685 ntBASIC1.84□□□□□ -2.12
CDH12P55289 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH12P55289 MIR449A-201ENST00000362113 91 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNA5SP276-201ENST00000362580 94 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
CDH12P55289 Y_RNA.199-201ENST00000364014 102 ntBASIC1.83□□□□□ -2.12
CDH12P55289 SNORA63D-201ENST00000364359 132 ntBASIC1.83□□□□□ -2.12
CDH12P55289 Y_RNA.267-201ENST00000364679 109 ntBASIC1.83□□□□□ -2.12
CDH12P55289 Y_RNA.293-201ENST00000364908 93 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
CDH12P55289 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
CDH12P55289 COX6CP14-201ENST00000469580 174 ntBASIC1.83□□□□□ -2.12
CDH12P55289 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH12P55289 RNU6-138P-201ENST00000515952 107 ntBASIC1.83□□□□□ -2.12
CDH12P55289 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.83□□□□□ -2.12
CDH12P55289 AC100767.1-201ENST00000528178 123 ntBASIC1.83□□□□□ -2.12
CDH12P55289 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
CDH12P55289 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
CDH12P55289 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.83□□□□□ -2.12
CDH12P55289 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.83□□□□□ -2.12
CDH12P55289 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CDH12P55289 ZNF702P-202ENST00000434269 1966 ntBASIC1.82□□□□□ -2.12
CDH12P55289 RNU6-200P-201ENST00000364743 107 ntBASIC1.82□□□□□ -2.12
CDH12P55289 RNU6-1080P-201ENST00000383982 107 ntBASIC1.82□□□□□ -2.12
CDH12P55289 Y_RNA.572-201ENST00000384757 98 ntBASIC1.82□□□□□ -2.12
CDH12P55289 MIR17-201ENST00000385012 84 ntBASIC1.82□□□□□ -2.12
CDH12P55289 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
CDH12P55289 Z98742.3-201ENST00000418637 326 ntBASIC1.82□□□□□ -2.12
CDH12P55289 AC233266.1-201ENST00000454518 96 ntBASIC1.82□□□□□ -2.12
CDH12P55289 RNU7-94P-201ENST00000459576 63 ntBASIC1.82□□□□□ -2.12
CDH12P55289 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
CDH12P55289 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH12P55289 RNA5SP437-201ENST00000517249 129 ntBASIC1.82□□□□□ -2.12
CDH12P55289 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH12P55289 AC242852.1-201ENST00000612151 96 ntBASIC1.82□□□□□ -2.12
CDH12P55289 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
CDH12P55289 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
CDH12P55289 MIR6852-201ENST00000621699 66 ntBASIC1.82□□□□□ -2.12
CDH12P55289 AC244015.1-201ENST00000622301 99 ntBASIC1.82□□□□□ -2.12
CDH12P55289 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
CDH12P55289 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH12P55289 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDH12P55289 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CDH12P55289 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH12P55289 MIR411-201ENST00000362239 96 ntBASIC1.81□□□□□ -2.12
CDH12P55289 SNORA1B-201ENST00000362535 133 ntBASIC1.81□□□□□ -2.12
CDH12P55289 Y_RNA.83-201ENST00000363005 113 ntBASIC1.81□□□□□ -2.12
CDH12P55289 Y_RNA.262-201ENST00000364641 102 ntBASIC1.81□□□□□ -2.12
CDH12P55289 Y_RNA.297-201ENST00000364950 91 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms