Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LIMK1P53667 Y_RNA.5-201ENST00000362334 102 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 SNORD114-7-201ENST00000362520 77 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 SNORD115-30-201ENST00000364117 82 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 Y_RNA.230-201ENST00000364348 109 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 RNU1-115P-201ENST00000365329 160 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 Y_RNA.419-201ENST00000384041 102 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 Y_RNA.446-201ENST00000384178 104 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 MIR520G-201ENST00000385064 90 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 AL031003.1-201ENST00000404229 172 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 MTND1P14-201ENST00000427400 950 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMK1P53667 AL049830.1-201ENST00000468034 425 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 RNU4-77P-201ENST00000516692 156 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 RNU6-1096P-201ENST00000517089 102 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 AP002004.2-201ENST00000531656 154 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 AL078604.3-201ENST00000615580 211 ntBASIC1.43□□□□□ -2.18
LIMK1P53667 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
LIMK1P53667 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU6-867P-201ENST00000364956 107 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU6-1175P-201ENST00000365200 107 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 Y_RNA.526-201ENST00000384572 110 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU6-1337P-201ENST00000516525 95 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 RNU7-28P-201ENST00000516759 62 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 AL390123.1-201ENST00000603216 237 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 AL080274.1-201ENST00000605565 220 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 AL365434.2-201ENST00000607979 234 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 AC106754.2-201ENST00000623006 233 ntBASIC1.42□□□□□ -2.18
LIMK1P53667 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIMK1P53667 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LIMK1P53667 MIR369-201ENST00000362155 70 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 SNORA1B-201ENST00000362535 133 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 Y_RNA.813-201ENST00000364639 102 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 RNU5E-4P-201ENST00000364931 120 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 Y_RNA.424-201ENST00000384063 103 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 RNA5SP511-201ENST00000410487 115 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 RNU5A-5P-201ENST00000411054 116 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 RPEP5-201ENST00000441137 268 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 SNORA40.14-201ENST00000516543 86 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 RN7SKP295-201ENST00000517264 153 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.41□□□□□ -2.18
LIMK1P53667 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 AC090971.5-201ENST00000621102 293 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 AL513423.1-201ENST00000621695 132 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 AC091925.1-201ENST00000623204 462 ntBASIC1.41□□□□□ -2.18
LIMK1P53667 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LIMK1P53667 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LIMK1P53667 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 SNORD14.1-201ENST00000365609 90 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.4□□□□□ -2.19
LIMK1P53667 RNA5SP168-201ENST00000516642 112 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.19
LIMK1P53667 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.4□□□□□ -2.19
LIMK1P53667 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 AC091178.2-201ENST00000584401 117 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 AL117336.2-201ENST00000602435 335 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
LIMK1P53667 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
LIMK1P53667 RNU4-76P-201ENST00000364509 141 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 RNU6-117P-201ENST00000365415 107 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 Y_RNA.439-201ENST00000384119 94 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 MIR520E-201ENST00000384867 87 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 RNA5SP482-201ENST00000391269 118 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
LIMK1P53667 AL354751.2-201ENST00000415471 210 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 HSPE1P13-201ENST00000451143 297 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 U8.20-201ENST00000459445 131 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 RNU7-12P-201ENST00000516030 62 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 RNU7-110P-201ENST00000516891 62 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.39□□□□□ -2.19
LIMK1P53667 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 AL121655.1-201ENST00000605811 308 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 AC011373.1-201ENST00000607270 237 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 SNORD58B-201ENST00000607313 66 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 AC007485.1-201ENST00000616755 206 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LIMK1P53667 AC005592.1-201ENST00000566527 1640 ntBASIC1.39□□□□□ -2.19
LIMK1P53667 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LIMK1P53667 RNU4-50P-201ENST00000364361 141 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 Y_RNA.331-201ENST00000365267 102 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 Y_RNA.458-201ENST00000384240 102 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 Y_RNA.471-201ENST00000384312 102 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 MIR660-201ENST00000385235 97 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 MIR618-201ENST00000385287 98 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 AL390729.2-201ENST00000416137 156 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
LIMK1P53667 AC005042.3-201ENST00000453230 174 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.38□□□□□ -2.19
LIMK1P53667 RNU6-436P-201ENST00000516171 114 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 Y_RNA.713-201ENST00000517013 96 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms