Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 BX295541.1-201ENST00000417774 250 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AC092447.3-201ENST00000426027 686 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 Z82188.1-201ENST00000436709 154 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 SNORD57-201ENST00000448188 72 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 MTND2P14-201ENST00000482139 351 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AC018710.1-201ENST00000506509 158 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AC074198.2-201ENST00000508153 258 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 RNU6-107P-201ENST00000516643 102 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 PIGPP4-201ENST00000584447 307 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 MIR4723-201ENST00000585070 81 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AC010525.2-201ENST00000590920 195 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 AL357078.3-201ENST00000607528 618 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 MIR377-201ENST00000362145 69 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-447P-201ENST00000410293 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-355P-201ENST00000410427 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-791P-201ENST00000410467 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-705P-201ENST00000410601 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-860P-201ENST00000410860 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-785P-201ENST00000411324 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RPL30P16-201ENST00000419341 429 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 AL137792.2-201ENST00000443484 235 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 IGKV1-22-201ENST00000524313 326 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.41□□□□□ -2.47
NUP98P52948 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 AC016597.2-201ENST00000613256 341 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 U6.90-201ENST00000614007 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 U6.70-201ENST00000620287 104 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 AC127459.3-201ENST00000624328 466 ntBASIC-0.41□□□□□ -2.47
NUP98P52948 RNU6-756P-201ENST00000383997 107 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 RNY3P9-201ENST00000384727 106 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 RNA5SP475-201ENST00000410568 110 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 MIR18B-201ENST00000454574 71 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.41□□□□□ -2.48
NUP98P52948 AC116353.2-201ENST00000505332 712 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 RNU6-782P-201ENST00000516852 104 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 AC007751.1-201ENST00000529260 376 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 AC138869.1-201ENST00000568623 124 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 MIR5692C1-201ENST00000585309 91 ntBASIC-0.41□□□□□ -2.48
NUP98P52948 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.41□□□□□ -2.48
NUP98P52948 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 SSR1P2-201ENST00000415208 787 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 AC073464.1-201ENST00000429823 534 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 AC091885.1-201ENST00000506658 268 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.42□□□□□ -2.48
NUP98P52948 MIR5696-201ENST00000578474 85 ntBASIC-0.42□□□□□ -2.48
NUP98P52948 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.42□□□□□ -2.48
NUP98P52948 SNORD113-6-201ENST00000363345 75 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 RNU6-281P-201ENST00000384212 103 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 RNU6-131P-201ENST00000391144 107 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 MIR548H2-201ENST00000408874 88 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AC069271.1-201ENST00000445577 156 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.43□□□□□ -2.48
NUP98P52948 AL356010.1-201ENST00000456364 102 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.43□□□□□ -2.48
NUP98P52948 SNORD45.4-201ENST00000516629 73 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AC006157.1-201ENST00000611750 366 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AL158063.1-201ENST00000615349 536 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 MIR548AZ-201ENST00000616567 95 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AC103705.1-201ENST00000619013 241 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 MIR570-201ENST00000384917 97 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 RNU6-205P-201ENST00000390858 107 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 MTCYBP8-201ENST00000422855 651 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.43□□□□□ -2.48
NUP98P52948 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 SNORD92-201ENST00000585078 85 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AL022161.1-201ENST00000604390 213 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AC107308.1-201ENST00000615897 301 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 AC005609.4-201ENST00000625071 447 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 U6.115-201ENST00000636045 103 ntBASIC-0.43□□□□□ -2.48
NUP98P52948 SNORD50B-201ENST00000364995 70 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 RNU6-269P-201ENST00000391077 97 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 AC079354.2-201ENST00000453523 154 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 AC046134.1-201ENST00000514454 666 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 AC072046.2-201ENST00000618366 268 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 AC073534.2-201ENST00000620377 381 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.44□□□□□ -2.48
NUP98P52948 RNU6-996P-201ENST00000365438 107 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AL512326.2-201ENST00000426359 151 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTCO2P16-201ENST00000436962 677 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTCO1P29-201ENST00000496868 288 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 SNORA18.6-201ENST00000516792 115 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 RNY1P9-201ENST00000532431 109 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.45□□□□□ -2.48
NUP98P52948 MIR4676-201ENST00000583078 72 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms