Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
PDX1P52945 MIR4709-201ENST00000577272 72 ntBASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.812-201ENST00000610788 101 ntBASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.784-201ENST00000613803 101 ntBASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.787-201ENST00000616522 101 ntBASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.780-201ENST00000617336 101 ntBASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.801-201ENST00000619005 101 ntBASIC1.55□□□□□ -2.16
PDX1P52945 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.55□□□□□ -2.16
PDX1P52945 Y_RNA.64-201ENST00000362845 102 ntBASIC1.54□□□□□ -2.16
PDX1P52945 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
PDX1P52945 SNORA63C-201ENST00000364578 129 ntBASIC1.54□□□□□ -2.16
PDX1P52945 Y_RNA.276-201ENST00000364732 109 ntBASIC1.54□□□□□ -2.16
PDX1P52945 Y_RNA.383-201ENST00000383855 97 ntBASIC1.54□□□□□ -2.16
PDX1P52945 Y_RNA.418-201ENST00000384029 102 ntBASIC1.54□□□□□ -2.16
PDX1P52945 RNU6-1160P-201ENST00000384546 104 ntBASIC1.54□□□□□ -2.16
PDX1P52945 MIR215-201ENST00000384858 110 ntBASIC1.54□□□□□ -2.16
PDX1P52945 MTATP8P1-201ENST00000467115 207 ntBASIC1.54□□□□□ -2.16
PDX1P52945 RPL36AP21-201ENST00000490372 323 ntBASIC1.54□□□□□ -2.16
PDX1P52945 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
PDX1P52945 SNORD113-5-201ENST00000607261 78 ntBASIC1.54□□□□□ -2.16
PDX1P52945 AC021506.2-201ENST00000612354 169 ntBASIC1.54□□□□□ -2.16
PDX1P52945 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
PDX1P52945 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PDX1P52945 Y_RNA.19-201ENST00000362462 99 ntBASIC1.53□□□□□ -2.16
PDX1P52945 SNORA1B-201ENST00000362535 133 ntBASIC1.53□□□□□ -2.16
PDX1P52945 snoU2_19.2-201ENST00000363024 80 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNU4-80P-201ENST00000363200 141 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNU6-770P-201ENST00000363929 105 ntBASIC1.53□□□□□ -2.16
PDX1P52945 Y_RNA.222-201ENST00000364264 102 ntBASIC1.53□□□□□ -2.16
PDX1P52945 Y_RNA.267-201ENST00000364679 109 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
PDX1P52945 MIR606-201ENST00000384851 96 ntBASIC1.53□□□□□ -2.16
PDX1P52945 MIR499A-201ENST00000384903 122 ntBASIC1.53□□□□□ -2.16
PDX1P52945 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PDX1P52945 RNU6-440P-201ENST00000390882 105 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNU6-360P-201ENST00000390944 104 ntBASIC1.53□□□□□ -2.16
PDX1P52945 Y_RNA.581-201ENST00000391017 97 ntBASIC1.53□□□□□ -2.16
PDX1P52945 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNU6-855P-201ENST00000410395 104 ntBASIC1.53□□□□□ -2.16
PDX1P52945 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
PDX1P52945 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
PDX1P52945 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
PDX1P52945 POLR2KP2-201ENST00000438155 177 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RPS4XP11-201ENST00000446897 772 ntBASIC1.53□□□□□ -2.16
PDX1P52945 MTND5P22-201ENST00000458380 195 ntBASIC1.53□□□□□ -2.16
PDX1P52945 RNY3P15-201ENST00000516297 97 ntBASIC1.53□□□□□ -2.16
PDX1P52945 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.53□□□□□ -2.16
PDX1P52945 RPL21P9-201ENST00000556149 474 ntBASIC1.53□□□□□ -2.16
PDX1P52945 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PDX1P52945 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.53□□□□□ -2.16
PDX1P52945 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
PDX1P52945 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
PDX1P52945 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
PDX1P52945 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PDX1P52945 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PDX1P52945 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
PDX1P52945 AL162725.1-201ENST00000435405 301 ntBASIC1.52□□□□□ -2.17
PDX1P52945 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
PDX1P52945 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RPS20P10-201ENST00000451209 253 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RNU7-94P-201ENST00000459576 63 ntBASIC1.52□□□□□ -2.17
PDX1P52945 SEPT14P8-201ENST00000508026 178 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RNU6-341P-201ENST00000516973 96 ntBASIC1.52□□□□□ -2.17
PDX1P52945 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
PDX1P52945 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
PDX1P52945 AC006504.6-201ENST00000590142 199 ntBASIC1.52□□□□□ -2.17
PDX1P52945 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
PDX1P52945 RNU4-13P-201ENST00000364019 141 ntBASIC1.51□□□□□ -2.17
PDX1P52945 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
PDX1P52945 SNORA25.9-201ENST00000365087 128 ntBASIC1.51□□□□□ -2.17
PDX1P52945 Y_RNA.512-201ENST00000384518 102 ntBASIC1.51□□□□□ -2.17
PDX1P52945 Y_RNA.541-201ENST00000384640 113 ntBASIC1.51□□□□□ -2.17
PDX1P52945 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
PDX1P52945 MIR30A-201ENST00000385092 71 ntBASIC1.51□□□□□ -2.17
PDX1P52945 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
PDX1P52945 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
PDX1P52945 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
PDX1P52945 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
PDX1P52945 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
PDX1P52945 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.51□□□□□ -2.17
PDX1P52945 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
PDX1P52945 Y_RNA.310-201ENST00000365063 113 ntBASIC1.5□□□□□ -2.17
PDX1P52945 MIR520G-201ENST00000385064 90 ntBASIC1.5□□□□□ -2.17
PDX1P52945 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
PDX1P52945 Y_RNA.720-201ENST00000517166 92 ntBASIC1.5□□□□□ -2.17
PDX1P52945 AP003733.2-201ENST00000529409 171 ntBASIC1.5□□□□□ -2.17
PDX1P52945 AC099654.10-201ENST00000640395 161 ntBASIC1.5□□□□□ -2.17
PDX1P52945 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
PDX1P52945 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PDX1P52945 Y_RNA.16-201ENST00000362421 102 ntBASIC1.49□□□□□ -2.17
PDX1P52945 RNU4-90P-201ENST00000362773 141 ntBASIC1.49□□□□□ -2.17
PDX1P52945 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
PDX1P52945 RNU6-290P-201ENST00000365212 101 ntBASIC1.49□□□□□ -2.17
PDX1P52945 Y_RNA.368-201ENST00000365547 113 ntBASIC1.49□□□□□ -2.17
PDX1P52945 RNU6-1080P-201ENST00000383982 107 ntBASIC1.49□□□□□ -2.17
PDX1P52945 Y_RNA.422-201ENST00000384054 114 ntBASIC1.49□□□□□ -2.17
PDX1P52945 RNU6-738P-201ENST00000384531 106 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms