Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
CLK1P49759 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLK1P49759 RNU6-418P-201ENST00000384035 107 ntBASIC1.75□□□□□ -2.13
CLK1P49759 RNU6-514P-201ENST00000384208 107 ntBASIC1.75□□□□□ -2.13
CLK1P49759 RNU6-1289P-201ENST00000384431 106 ntBASIC1.75□□□□□ -2.13
CLK1P49759 Y_RNA.515-201ENST00000384535 112 ntBASIC1.75□□□□□ -2.13
CLK1P49759 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
CLK1P49759 AC010409.1-201ENST00000487382 476 ntBASIC1.75□□□□□ -2.13
CLK1P49759 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CLK1P49759 AP001485.1-201ENST00000604799 199 ntBASIC1.75□□□□□ -2.13
CLK1P49759 AC013412.1-201ENST00000610687 192 ntBASIC1.75□□□□□ -2.13
CLK1P49759 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.75□□□□□ -2.13
CLK1P49759 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLK1P49759 RNU6-1272P-201ENST00000362776 107 ntBASIC1.74□□□□□ -2.13
CLK1P49759 Y_RNA.124-201ENST00000363339 93 ntBASIC1.74□□□□□ -2.13
CLK1P49759 SNORD114-6-201ENST00000364393 72 ntBASIC1.74□□□□□ -2.13
CLK1P49759 RNY4P28-201ENST00000365281 93 ntBASIC1.74□□□□□ -2.13
CLK1P49759 RNU6-1235P-201ENST00000384559 107 ntBASIC1.74□□□□□ -2.13
CLK1P49759 RNU6-57P-201ENST00000411348 103 ntBASIC1.74□□□□□ -2.13
CLK1P49759 SNORD65B-201ENST00000459126 73 ntBASIC1.74□□□□□ -2.13
CLK1P49759 RNU6-498P-201ENST00000459468 107 ntBASIC1.74□□□□□ -2.13
CLK1P49759 AC114982.1-201ENST00000469402 321 ntBASIC1.74□□□□□ -2.13
CLK1P49759 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.74□□□□□ -2.13
CLK1P49759 AC025647.1-201ENST00000517879 253 ntBASIC1.74□□□□□ -2.13
CLK1P49759 AL008718.3-201ENST00000610217 321 ntBASIC1.74□□□□□ -2.13
CLK1P49759 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.74□□□□□ -2.13
CLK1P49759 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLK1P49759 AC068700.1-201ENST00000565862 3754 ntBASIC1.74□□□□□ -2.13
CLK1P49759 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLK1P49759 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLK1P49759 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLK1P49759 SNORD114-1-201ENST00000362705 72 ntBASIC1.73□□□□□ -2.13
CLK1P49759 RNU6-324P-201ENST00000363957 106 ntBASIC1.73□□□□□ -2.13
CLK1P49759 RNU6-439P-201ENST00000384188 106 ntBASIC1.73□□□□□ -2.13
CLK1P49759 SNORA20B-201ENST00000384220 132 ntBASIC1.73□□□□□ -2.13
CLK1P49759 MIR1298-201ENST00000408783 112 ntBASIC1.73□□□□□ -2.13
CLK1P49759 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.73□□□□□ -2.13
CLK1P49759 Z98949.2-201ENST00000440996 144 ntBASIC1.73□□□□□ -2.13
CLK1P49759 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
CLK1P49759 HSPE1P24-201ENST00000450782 238 ntBASIC1.73□□□□□ -2.13
CLK1P49759 RPS29P23-201ENST00000458635 123 ntBASIC1.73□□□□□ -2.13
CLK1P49759 Y_RNA.637-201ENST00000459424 114 ntBASIC1.73□□□□□ -2.13
CLK1P49759 RNU6-948P-201ENST00000516374 107 ntBASIC1.73□□□□□ -2.13
CLK1P49759 RNU2-34P-201ENST00000516534 121 ntBASIC1.73□□□□□ -2.13
CLK1P49759 MIR5094-201ENST00000578766 85 ntBASIC1.73□□□□□ -2.13
CLK1P49759 MIR3945-201ENST00000581853 98 ntBASIC1.73□□□□□ -2.13
CLK1P49759 AL512605.2-201ENST00000592972 256 ntBASIC1.73□□□□□ -2.13
CLK1P49759 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLK1P49759 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
CLK1P49759 SNORD114-7-201ENST00000362520 77 ntBASIC1.72□□□□□ -2.13
CLK1P49759 SNORA27.1-201ENST00000362604 124 ntBASIC1.72□□□□□ -2.13
CLK1P49759 Y_RNA.172-201ENST00000363765 102 ntBASIC1.72□□□□□ -2.13
CLK1P49759 Y_RNA.200-201ENST00000364018 102 ntBASIC1.72□□□□□ -2.13
CLK1P49759 RNU6-801P-201ENST00000364087 105 ntBASIC1.72□□□□□ -2.13
CLK1P49759 Y_RNA.292-201ENST00000364904 97 ntBASIC1.72□□□□□ -2.13
CLK1P49759 Y_RNA.785-201ENST00000384290 109 ntBASIC1.72□□□□□ -2.13
CLK1P49759 Y_RNA.590-201ENST00000410140 107 ntBASIC1.72□□□□□ -2.13
CLK1P49759 AL121890.1-201ENST00000435457 205 ntBASIC1.72□□□□□ -2.13
CLK1P49759 AC074290.1-201ENST00000448883 135 ntBASIC1.72□□□□□ -2.13
CLK1P49759 SUMO1P2-201ENST00000452524 304 ntBASIC1.72□□□□□ -2.13
CLK1P49759 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
CLK1P49759 RNU6-856P-201ENST00000516959 98 ntBASIC1.72□□□□□ -2.13
CLK1P49759 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.72□□□□□ -2.13
CLK1P49759 MIR3684-201ENST00000579779 74 ntBASIC1.72□□□□□ -2.13
CLK1P49759 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.72□□□□□ -2.13
CLK1P49759 snoU18.1-201ENST00000629629 71 ntBASIC1.72□□□□□ -2.13
CLK1P49759 AL159152.1-201ENST00000635019 2587 ntBASIC1.72□□□□□ -2.13
CLK1P49759 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
CLK1P49759 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
CLK1P49759 Y_RNA.310-201ENST00000365063 113 ntBASIC1.71□□□□□ -2.14
CLK1P49759 Y_RNA.368-201ENST00000365547 113 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RNU6-763P-201ENST00000390865 106 ntBASIC1.71□□□□□ -2.14
CLK1P49759 SNORA26.5-201ENST00000391215 123 ntBASIC1.71□□□□□ -2.14
CLK1P49759 MIR873-201ENST00000401120 77 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.71□□□□□ -2.14
CLK1P49759 MIR548I3-201ENST00000408378 149 ntBASIC1.71□□□□□ -2.14
CLK1P49759 MIR548I1-201ENST00000408810 149 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
CLK1P49759 Y_RNA.626-201ENST00000411288 95 ntBASIC1.71□□□□□ -2.14
CLK1P49759 COX6CP14-201ENST00000469580 174 ntBASIC1.71□□□□□ -2.14
CLK1P49759 AC010598.1-201ENST00000510378 103 ntBASIC1.71□□□□□ -2.14
CLK1P49759 RNA5SP445-201ENST00000515889 115 ntBASIC1.71□□□□□ -2.14
CLK1P49759 Y_RNA.700-201ENST00000516806 100 ntBASIC1.71□□□□□ -2.14
CLK1P49759 AL078604.3-201ENST00000615580 211 ntBASIC1.71□□□□□ -2.14
CLK1P49759 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLK1P49759 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.71□□□□□ -2.14
CLK1P49759 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.7□□□□□ -2.14
CLK1P49759 MIR411-201ENST00000362239 96 ntBASIC1.7□□□□□ -2.14
CLK1P49759 Y_RNA.83-201ENST00000363005 113 ntBASIC1.7□□□□□ -2.14
CLK1P49759 Y_RNA.199-201ENST00000364014 102 ntBASIC1.7□□□□□ -2.14
CLK1P49759 Y_RNA.297-201ENST00000364950 91 ntBASIC1.7□□□□□ -2.14
CLK1P49759 RNU6-211P-201ENST00000384047 107 ntBASIC1.7□□□□□ -2.14
CLK1P49759 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
CLK1P49759 U8.19-201ENST00000459095 133 ntBASIC1.7□□□□□ -2.14
CLK1P49759 Y_RNA.638-201ENST00000459374 113 ntBASIC1.7□□□□□ -2.14
CLK1P49759 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
CLK1P49759 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.7□□□□□ -2.14
CLK1P49759 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms