Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-417P-201ENST00000384712 107 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 RNU2-38P-201ENST00000410856 79 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 HMGN2P34-201ENST00000437647 269 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 RPL21P9-201ENST00000556149 474 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 AC012433.1-201ENST00000588916 398 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 MIR338-201ENST00000636369 67 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HNF4AP41235 RNU6-1266P-201ENST00000362794 105 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNU4-80P-201ENST00000363200 141 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 Y_RNA.136-201ENST00000363444 102 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNU6-326P-201ENST00000365480 107 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNA5SP467-201ENST00000391274 118 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNU2-61P-201ENST00000411069 191 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.61□□□□□ -2.15
HNF4AP41235 MTCO1P5-201ENST00000433573 344 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNU6-1132P-201ENST00000459214 107 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 MTND1P19-201ENST00000511780 315 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 SERF1AP1-201ENST00000514575 187 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNA5SP20-201ENST00000515976 84 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 Y_RNA.680-201ENST00000516441 93 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 RNU2-31P-201ENST00000516954 155 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.61□□□□□ -2.15
HNF4AP41235 AC004817.2-201ENST00000561794 651 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.61□□□□□ -2.15
HNF4AP41235 MIR3684-201ENST00000579779 74 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 AC062037.2-201ENST00000610137 73 ntBASIC1.61□□□□□ -2.15
HNF4AP41235 MIR335-201ENST00000362173 94 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 Y_RNA.14-201ENST00000362415 103 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 SNORD33-201ENST00000362761 85 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 snoU2-30.2-201ENST00000362805 70 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 SNORA33-201ENST00000363664 130 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 MIR873-201ENST00000401120 77 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 MIR1253-201ENST00000408273 105 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.6□□□□□ -2.15
HNF4AP41235 AL591806.2-201ENST00000433122 173 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 AL135790.2-201ENST00000437701 267 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.6□□□□□ -2.15
HNF4AP41235 RNU6-1146P-201ENST00000516282 102 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 RNU6-191P-201ENST00000516295 94 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 RNU6-902P-201ENST00000517212 91 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.6□□□□□ -2.15
HNF4AP41235 U6.104-201ENST00000637979 90 ntBASIC1.6□□□□□ -2.15
HNF4AP41235 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HNF4AP41235 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.59□□□□□ -2.15
HNF4AP41235 SNORD114-7-201ENST00000362520 77 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 Y_RNA.307-201ENST00000365022 117 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 Y_RNA.562-201ENST00000384695 113 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 MIR515-2-201ENST00000384883 83 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 MIR515-1-201ENST00000384884 83 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 SNORA53-201ENST00000391141 249 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.59□□□□□ -2.15
HNF4AP41235 RPS27P22-201ENST00000478056 241 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 RNU6-548P-201ENST00000517083 115 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
HNF4AP41235 AP000942.4-201ENST00000604811 241 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 U6.73-201ENST00000619194 103 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HNF4AP41235 MIR7843-201ENST00000622274 79 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 U6.108-201ENST00000637764 58 ntBASIC1.59□□□□□ -2.15
HNF4AP41235 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.58□□□□□ -2.16
HNF4AP41235 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.58□□□□□ -2.16
HNF4AP41235 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 Y_RNA.477-201ENST00000384352 108 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 MIR764-201ENST00000390811 85 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 SUMO1P2-201ENST00000452524 304 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 snoU13.27-201ENST00000459278 104 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 AC091959.1-201ENST00000495857 238 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 RNU6-1337P-201ENST00000516525 95 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 RNU6-63P-201ENST00000516690 95 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 RNU7-128P-201ENST00000517247 62 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.58□□□□□ -2.16
HNF4AP41235 MIR4643-201ENST00000577473 78 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 MIR4438-201ENST00000585271 93 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 AL121890.5-201ENST00000620848 304 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 AC006435.5-201ENST00000624486 112 ntBASIC1.58□□□□□ -2.16
HNF4AP41235 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HNF4AP41235 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU1-22P-201ENST00000363334 158 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU6-801P-201ENST00000364087 105 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 Y_RNA.310-201ENST00000365063 113 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU6-117P-201ENST00000365415 107 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 Y_RNA.447-201ENST00000384184 113 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU6-662P-201ENST00000384253 104 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 AL603910.2-201ENST00000407268 136 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU6-1186P-201ENST00000410429 97 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RNU6-651P-201ENST00000411040 105 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.57□□□□□ -2.16
HNF4AP41235 AC079140.2-201ENST00000506193 142 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 SNORA27.4-201ENST00000516650 95 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 AL137100.2-201ENST00000555786 315 ntBASIC1.57□□□□□ -2.16
HNF4AP41235 MIR3128-201ENST00000581957 66 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms