Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL162725.1-201ENST00000435405 301 ntBASIC0.76□□□□□ -2.29
RORAP35398 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
RORAP35398 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.76□□□□□ -2.29
RORAP35398 ELOCP24-201ENST00000456370 334 ntBASIC0.76□□□□□ -2.29
RORAP35398 LINC01399-202ENST00000458450 244 ntBASIC0.76□□□□□ -2.29
RORAP35398 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
RORAP35398 RNU6-408P-201ENST00000515910 100 ntBASIC0.76□□□□□ -2.29
RORAP35398 RNU6-966P-201ENST00000516479 104 ntBASIC0.76□□□□□ -2.29
RORAP35398 RNU6-1337P-201ENST00000516525 95 ntBASIC0.76□□□□□ -2.29
RORAP35398 Y_RNA.691-201ENST00000516611 103 ntBASIC0.76□□□□□ -2.29
RORAP35398 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.76□□□□□ -2.29
RORAP35398 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.76□□□□□ -2.29
RORAP35398 AC120024.3-201ENST00000603167 156 ntBASIC0.76□□□□□ -2.29
RORAP35398 AL391903.3-201ENST00000612158 163 ntBASIC0.76□□□□□ -2.29
RORAP35398 AC004467.1-201ENST00000615678 330 ntBASIC0.76□□□□□ -2.29
RORAP35398 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.76□□□□□ -2.29
RORAP35398 MIR6515-201ENST00000619843 57 ntBASIC0.76□□□□□ -2.29
RORAP35398 Y_RNA.101-201ENST00000363154 102 ntBASIC0.75□□□□□ -2.29
RORAP35398 Y_RNA.172-201ENST00000363765 102 ntBASIC0.75□□□□□ -2.29
RORAP35398 Y_RNA.336-201ENST00000365307 109 ntBASIC0.75□□□□□ -2.29
RORAP35398 SNORD116-13-201ENST00000384408 92 ntBASIC0.75□□□□□ -2.29
RORAP35398 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
RORAP35398 PIGPP3-201ENST00000425307 415 ntBASIC0.75□□□□□ -2.29
RORAP35398 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.75□□□□□ -2.29
RORAP35398 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.75□□□□□ -2.29
RORAP35398 SNORA25.10-201ENST00000515926 124 ntBASIC0.75□□□□□ -2.29
RORAP35398 SNORD111.1-201ENST00000516421 86 ntBASIC0.75□□□□□ -2.29
RORAP35398 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
RORAP35398 AC136628.3-201ENST00000521868 290 ntBASIC0.75□□□□□ -2.29
RORAP35398 AC005899.2-201ENST00000584353 90 ntBASIC0.75□□□□□ -2.29
RORAP35398 PISRT1.1-201ENST00000616930 107 ntBASIC0.75□□□□□ -2.29
RORAP35398 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
RORAP35398 U8.5-201ENST00000364528 136 ntBASIC0.74□□□□□ -2.29
RORAP35398 Y_RNA.279-201ENST00000364763 95 ntBASIC0.74□□□□□ -2.29
RORAP35398 Y_RNA.540-201ENST00000384638 111 ntBASIC0.74□□□□□ -2.29
RORAP35398 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RORAP35398 MIR891A-201ENST00000401237 79 ntBASIC0.74□□□□□ -2.29
RORAP35398 Y_RNA.592-201ENST00000410274 109 ntBASIC0.74□□□□□ -2.29
RORAP35398 Y_RNA.646-201ENST00000410980 101 ntBASIC0.74□□□□□ -2.29
RORAP35398 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.74□□□□□ -2.29
RORAP35398 AC093019.1-201ENST00000443135 252 ntBASIC0.74□□□□□ -2.29
RORAP35398 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.74□□□□□ -2.29
RORAP35398 AC245047.8-201ENST00000456455 284 ntBASIC0.74□□□□□ -2.29
RORAP35398 RPL30P15-201ENST00000457129 321 ntBASIC0.74□□□□□ -2.29
RORAP35398 MIR2053-201ENST00000459295 91 ntBASIC0.74□□□□□ -2.29
RORAP35398 CYCTP-201ENST00000504253 315 ntBASIC0.74□□□□□ -2.29
RORAP35398 AC114811.1-201ENST00000507207 168 ntBASIC0.74□□□□□ -2.29
RORAP35398 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.74□□□□□ -2.29
RORAP35398 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RORAP35398 AL591926.4-201ENST00000616895 298 ntBASIC0.74□□□□□ -2.29
RORAP35398 AC027279.3-201ENST00000625055 122 ntBASIC0.74□□□□□ -2.29
RORAP35398 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
RORAP35398 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
RORAP35398 RNU6-767P-201ENST00000384132 107 ntBASIC0.73□□□□□ -2.29
RORAP35398 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
RORAP35398 AL031003.1-201ENST00000404229 172 ntBASIC0.73□□□□□ -2.29
RORAP35398 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
RORAP35398 RNU6-1199P-201ENST00000411249 104 ntBASIC0.73□□□□□ -2.29
RORAP35398 FCF1P9-201ENST00000412546 282 ntBASIC0.73□□□□□ -2.29
RORAP35398 MTND4P28-201ENST00000426217 387 ntBASIC0.73□□□□□ -2.29
RORAP35398 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
RORAP35398 MIR2355-201ENST00000517199 87 ntBASIC0.73□□□□□ -2.29
RORAP35398 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
RORAP35398 AP003716.2-201ENST00000528260 108 ntBASIC0.73□□□□□ -2.29
RORAP35398 MIR4762-201ENST00000585261 75 ntBASIC0.73□□□□□ -2.29
RORAP35398 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
RORAP35398 AC240442.1-201ENST00000616055 283 ntBASIC0.73□□□□□ -2.29
RORAP35398 AC068700.1-201ENST00000565862 3754 ntBASIC0.73□□□□□ -2.29
RORAP35398 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
RORAP35398 RNU6-845P-201ENST00000362578 103 ntBASIC0.72□□□□□ -2.29
RORAP35398 SNORD68-201ENST00000363214 84 ntBASIC0.72□□□□□ -2.29
RORAP35398 Y_RNA.112-201ENST00000363250 102 ntBASIC0.72□□□□□ -2.29
RORAP35398 Y_RNA.166-201ENST00000363730 102 ntBASIC0.72□□□□□ -2.29
RORAP35398 RNU1-133P-201ENST00000364867 167 ntBASIC0.72□□□□□ -2.29
RORAP35398 RNU6-926P-201ENST00000384075 107 ntBASIC0.72□□□□□ -2.29
RORAP35398 RNU6-310P-201ENST00000384655 107 ntBASIC0.72□□□□□ -2.29
RORAP35398 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
RORAP35398 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
RORAP35398 RPL23AP50-201ENST00000434149 455 ntBASIC0.72□□□□□ -2.29
RORAP35398 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.72□□□□□ -2.29
RORAP35398 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
RORAP35398 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
RORAP35398 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.72□□□□□ -2.29
RORAP35398 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
RORAP35398 AC098679.4-201ENST00000624241 654 ntBASIC0.72□□□□□ -2.29
RORAP35398 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
RORAP35398 CASC19-280ENST00000642102 1351 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-1188P-201ENST00000363795 107 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNY3P11-201ENST00000364153 102 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-1310P-201ENST00000384153 107 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-163P-201ENST00000384396 106 ntBASIC0.71□□□□□ -2.3
RORAP35398 Y_RNA.577-201ENST00000384794 101 ntBASIC0.71□□□□□ -2.3
RORAP35398 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
RORAP35398 SNORA75.6-201ENST00000391318 127 ntBASIC0.71□□□□□ -2.3
RORAP35398 MIR1298-201ENST00000408783 112 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-1156P-201ENST00000410365 100 ntBASIC0.71□□□□□ -2.3
RORAP35398 Y_RNA.599-201ENST00000410489 109 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-370P-201ENST00000411008 104 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU2-61P-201ENST00000411069 191 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-1304P-201ENST00000411374 106 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms