Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 U8.13-201ENST00000390842 128 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 RNU6-763P-201ENST00000390865 106 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 RNU2-14P-201ENST00000411053 191 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 AL356379.1-201ENST00000414105 126 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 AC245047.3-201ENST00000429428 127 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 Y_RNA.637-201ENST00000459424 114 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 MTND1P19-201ENST00000511780 315 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 Y_RNA.673-201ENST00000516306 88 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 RNA5SP200-201ENST00000516360 103 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 SCARNA16.3-201ENST00000516595 184 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.43□□□□□ -2.02
CNGA1P29973 AP003357.1-201ENST00000604497 148 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 Y_RNA.4-201ENST00000362333 112 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNU1-17P-201ENST00000363022 152 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNU6-1048P-201ENST00000364054 107 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNU6-740P-201ENST00000364734 105 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 AL603910.2-201ENST00000407268 136 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 HSPE1P21-201ENST00000438283 308 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNU7-141P-201ENST00000459304 62 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNA5SP57-201ENST00000459463 123 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.42□□□□□ -2.02
CNGA1P29973 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.42□□□□□ -2.02
CNGA1P29973 RNU7-115P-201ENST00000516433 55 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 RNU7-116P-201ENST00000516940 62 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 AP000942.3-201ENST00000603702 160 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 MIR548AY-201ENST00000617669 107 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.42□□□□□ -2.02
CNGA1P29973 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CNGA1P29973 AC100821.1-201ENST00000523153 2479 ntBASIC2.42□□□□□ -2.02
CNGA1P29973 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNGA1P29973 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.41□□□□□ -2.02
CNGA1P29973 Y_RNA.307-201ENST00000365022 117 ntBASIC2.41□□□□□ -2.02
CNGA1P29973 Y_RNA.401-201ENST00000383965 117 ntBASIC2.41□□□□□ -2.02
CNGA1P29973 AL445646.1-201ENST00000431784 216 ntBASIC2.41□□□□□ -2.02
CNGA1P29973 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.41□□□□□ -2.02
CNGA1P29973 RNA5SP481-201ENST00000516814 122 ntBASIC2.41□□□□□ -2.02
CNGA1P29973 MIR4299-201ENST00000577899 72 ntBASIC2.41□□□□□ -2.02
CNGA1P29973 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.41□□□□□ -2.02
CNGA1P29973 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.41□□□□□ -2.02
CNGA1P29973 U8.7-201ENST00000364940 136 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 Y_RNA.416-201ENST00000384014 113 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 RNU6-1289P-201ENST00000384431 106 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 MIR583-201ENST00000384846 75 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 RNU2-7P-201ENST00000410794 178 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 CYCSP49-201ENST00000420810 319 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 Y_RNA.680-201ENST00000516441 93 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 RNU6-1291P-201ENST00000516591 104 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 AL358944.1-201ENST00000528537 144 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 AC024405.2-202ENST00000532731 184 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 AC127455.1-201ENST00000565496 145 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.4□□□□□ -2.03
CNGA1P29973 AL162424.1-201ENST00000602325 221 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 MIR6845-201ENST00000613182 61 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 MIR8054-201ENST00000620877 86 ntBASIC2.4□□□□□ -2.03
CNGA1P29973 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CNGA1P29973 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.82-201ENST00000363000 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.92-201ENST00000363043 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.235-201ENST00000364412 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.267-201ENST00000364679 109 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.306-201ENST00000365015 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.312-201ENST00000365089 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.322-201ENST00000365151 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 SNORA4.2-201ENST00000365313 147 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.447-201ENST00000384184 113 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 SNORA72-201ENST00000384339 132 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 AC019129.1-201ENST00000403786 261 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.618-201ENST00000410949 107 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 BTF3P11-201ENST00000426582 477 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 HSPE1P9-201ENST00000440046 311 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 SNORD2.1-201ENST00000458762 69 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.650-201ENST00000459002 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 U8.19-201ENST00000459095 133 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 AC108729.3-201ENST00000513484 108 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 SNORA31.10-201ENST00000516482 106 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.777-201ENST00000516982 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 POLR3GP1-201ENST00000594073 261 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.771-201ENST00000598668 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 AL008718.3-201ENST00000610217 321 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 Y_RNA.789-201ENST00000622480 102 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 snoU18.1-201ENST00000629629 71 ntBASIC2.39□□□□□ -2.03
CNGA1P29973 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
CNGA1P29973 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CNGA1P29973 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CNGA1P29973 Y_RNA.20-201ENST00000362479 113 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 SNORA1B-201ENST00000362535 133 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 Y_RNA.117-201ENST00000363294 101 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 RNU6-899P-201ENST00000363947 107 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 Y_RNA.478-201ENST00000384358 107 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 SNORA48.3-201ENST00000391081 134 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 SNORA40.18-201ENST00000391200 128 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 RPL23AP6-201ENST00000446637 472 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC117454.1-201ENST00000491120 168 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC090255.1-201ENST00000495779 349 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms