Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.383-201ENST00000383855 97 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 RNU6-639P-201ENST00000384074 107 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 SNORD115-46-201ENST00000390982 71 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCD3P28288 HMGN1P10-201ENST00000474557 553 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 RNU6-1143P-201ENST00000516125 104 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 RNU7-116P-201ENST00000516940 62 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 RNU6-902P-201ENST00000517212 91 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 AC011604.1-201ENST00000545978 196 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 AC113195.1-201ENST00000579952 141 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 AL353997.5-201ENST00000618886 171 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ABCD3P28288 SNORA72-201ENST00000384339 132 ntBASIC1.62□□□□□ -2.15
ABCD3P28288 RNU6-1105P-201ENST00000384774 107 ntBASIC1.62□□□□□ -2.15
ABCD3P28288 Y_RNA.621-201ENST00000411065 96 ntBASIC1.62□□□□□ -2.15
ABCD3P28288 SNX2P2-201ENST00000424553 323 ntBASIC1.62□□□□□ -2.15
ABCD3P28288 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.62□□□□□ -2.15
ABCD3P28288 RNA5SP168-201ENST00000516642 112 ntBASIC1.62□□□□□ -2.15
ABCD3P28288 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.62□□□□□ -2.15
ABCD3P28288 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.62□□□□□ -2.15
ABCD3P28288 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCD3P28288 RNU4-90P-201ENST00000362773 141 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 Y_RNA.172-201ENST00000363765 102 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 Y_RNA.222-201ENST00000364264 102 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 Y_RNA.310-201ENST00000365063 113 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 RNU6-1323P-201ENST00000384025 107 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 Y_RNA.527-201ENST00000384573 102 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 AC131281.1-201ENST00000522984 164 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 AL121890.5-201ENST00000620848 304 ntBASIC1.61□□□□□ -2.15
ABCD3P28288 Y_RNA.422-201ENST00000384054 114 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 CYCSP49-201ENST00000420810 319 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 CALM2P4-201ENST00000430810 426 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 MTND4LP30-201ENST00000454092 297 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
ABCD3P28288 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.6□□□□□ -2.15
ABCD3P28288 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 Y_RNA.286-201ENST00000364813 102 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 MIR764-201ENST00000390811 85 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 Y_RNA.581-201ENST00000391017 97 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 U8.16-201ENST00000391279 133 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 Y_RNA.602-201ENST00000410535 92 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCD3P28288 RNU6-496P-201ENST00000516145 99 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 RNU6-764P-201ENST00000516396 105 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCD3P28288 AL442663.2-201ENST00000554385 511 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 MIR3145-201ENST00000580727 82 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 AL365434.2-201ENST00000607979 234 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 AC068647.2-201ENST00000637380 353 ntBASIC1.59□□□□□ -2.15
ABCD3P28288 RNU6-199P-201ENST00000362954 107 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 Y_RNA.136-201ENST00000363444 102 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 RNU6-770P-201ENST00000363929 105 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 Y_RNA.210-201ENST00000364161 110 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 RNU6-1080P-201ENST00000383982 107 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 AL590004.1-201ENST00000405321 300 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 RNU6-985P-201ENST00000410182 104 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 Z98949.2-201ENST00000440996 144 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 RPL39P38-201ENST00000467018 153 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 CYCTP-201ENST00000504253 315 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 AC024614.2-201ENST00000577584 372 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 AC027279.3-201ENST00000625055 122 ntBASIC1.58□□□□□ -2.16
ABCD3P28288 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ABCD3P28288 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ABCD3P28288 U8.5-201ENST00000364528 136 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 HSPE1P25-201ENST00000455484 251 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 AC010655.3-201ENST00000478818 450 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCD3P28288 RNU7-12P-201ENST00000516030 62 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 RNU6-1153P-201ENST00000516760 105 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.57□□□□□ -2.16
ABCD3P28288 MIR4762-201ENST00000585261 75 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 AP003357.1-201ENST00000604497 148 ntBASIC1.57□□□□□ -2.16
ABCD3P28288 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
ABCD3P28288 MIRLET7C-201ENST00000362160 84 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 Y_RNA.19-201ENST00000362462 99 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 RNU4-80P-201ENST00000363200 141 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 SNORD68-201ENST00000363214 84 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 RNA5SP99-201ENST00000364020 114 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 Y_RNA.214-201ENST00000364201 112 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 RNU6-290P-201ENST00000365212 101 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 Y_RNA.569-201ENST00000384749 103 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 RNY3P15-201ENST00000516297 97 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 AC136628.3-201ENST00000521868 290 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms