Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.04□□□□□ -1.92
ERCC3P19447 RNU7-120P-201ENST00000459334 63 ntBASIC3.04□□□□□ -1.92
ERCC3P19447 AL049830.1-201ENST00000468034 425 ntBASIC3.04□□□□□ -1.92
ERCC3P19447 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.04□□□□□ -1.92
ERCC3P19447 RNU6-453P-201ENST00000516819 85 ntBASIC3.04□□□□□ -1.92
ERCC3P19447 MIR2681-201ENST00000581814 105 ntBASIC3.04□□□□□ -1.92
ERCC3P19447 Z82195.2-201ENST00000612348 18351 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 SNORA25.6-201ENST00000364121 118 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 Y_RNA.229-201ENST00000364347 113 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 Y_RNA.265-201ENST00000364677 108 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 RNU1-51P-201ENST00000365345 176 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 MT-TT-201ENST00000387460 66 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 RNU6-381P-201ENST00000391259 108 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 RPS26P45-201ENST00000471748 340 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 Y_RNA.662-201ENST00000516028 97 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ERCC3P19447 SNORD53-201ENST00000579969 78 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 U1.36-201ENST00000620684 176 ntBASIC3.03□□□□□ -1.92
ERCC3P19447 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
ERCC3P19447 SNORA1B-201ENST00000362535 133 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 SNORA70B-201ENST00000384210 135 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 Y_RNA.587-201ENST00000391210 103 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 RN7SKP51-201ENST00000410781 304 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ERCC3P19447 AC069257.2-201ENST00000441819 155 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 AL606517.2-201ENST00000442855 241 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.02□□□□□ -1.93
ERCC3P19447 RN7SL297P-201ENST00000483161 293 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 AP002004.2-201ENST00000531656 154 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 AL049861.1-201ENST00000603130 150 ntBASIC3.02□□□□□ -1.93
ERCC3P19447 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.02□□□□□ -1.93
ERCC3P19447 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
ERCC3P19447 SNORD23.1-201ENST00000408212 104 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 RNA5SP450-201ENST00000411206 102 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 RNU6-1219P-201ENST00000516143 112 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.01□□□□□ -1.93
ERCC3P19447 AC022217.4-201ENST00000604389 163 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 MIR6895-201ENST00000613497 78 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 FTX_2.1-201ENST00000618816 94 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 AC012640.5-201ENST00000623897 319 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 AC064859.1-201ENST00000624741 174 ntBASIC3.01□□□□□ -1.93
ERCC3P19447 SNORD68-201ENST00000363214 84 ntBASIC3□□□□□ -1.93
ERCC3P19447 RNU6-674P-201ENST00000363831 107 ntBASIC3□□□□□ -1.93
ERCC3P19447 SNORA48.1-201ENST00000390879 135 ntBASIC3□□□□□ -1.93
ERCC3P19447 RNA5SP24-201ENST00000516478 95 ntBASIC3□□□□□ -1.93
ERCC3P19447 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3□□□□□ -1.93
ERCC3P19447 MIR5688-201ENST00000580619 83 ntBASIC3□□□□□ -1.93
ERCC3P19447 MIR4744-201ENST00000581563 82 ntBASIC3□□□□□ -1.93
ERCC3P19447 DLEU2_6.1-201ENST00000610536 112 ntBASIC3□□□□□ -1.93
ERCC3P19447 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ERCC3P19447 RNA5SP276-201ENST00000362580 94 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 RNU6-1209P-201ENST00000363655 107 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 RNU6-103P-201ENST00000363686 107 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 MIR616-201ENST00000385293 97 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 AL606845.1-201ENST00000404881 255 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 AC009310.1-201ENST00000414414 451 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
ERCC3P19447 AC245047.4-201ENST00000433189 144 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.99□□□□□ -1.93
ERCC3P19447 SCARNA8-201ENST00000515924 131 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 RNA5SP320-201ENST00000516263 124 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 RNA5SP82-201ENST00000516707 92 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 CTSLP2-204ENST00000629029 392 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 ZNF658B-202ENST00000615961 3375 ntBASIC2.99□□□□□ -1.93
ERCC3P19447 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ERCC3P19447 MIR126-201ENST00000362291 85 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 RNU6-682P-201ENST00000363843 106 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 MIR520A-201ENST00000384862 85 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 Y_RNA.622-201ENST00000411091 108 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 SNRPGP10-201ENST00000432323 225 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 AL121914.1-201ENST00000450188 156 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 HMGN1P7-201ENST00000491722 313 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 MIR5694-201ENST00000581190 76 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 AC078899.2-201ENST00000595282 212 ntBASIC2.98□□□□□ -1.93
ERCC3P19447 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ERCC3P19447 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ERCC3P19447 RNA5SP289-201ENST00000362332 137 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 Y_RNA.253-201ENST00000364562 112 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 SNORA6-201ENST00000384033 151 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 RNU6-440P-201ENST00000390882 105 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 RNA5SP496-201ENST00000391240 109 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 STAG3L5P-204ENST00000443759 179 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.97□□□□□ -1.93
ERCC3P19447 AC074198.2-201ENST00000508153 258 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 RNU2-19P-201ENST00000517288 84 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 U6.106-201ENST00000636360 105 ntBASIC2.97□□□□□ -1.93
ERCC3P19447 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
ERCC3P19447 RNA5SP432-201ENST00000362480 116 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 Y_RNA.121-201ENST00000363309 113 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 MIR27B-201ENST00000385129 97 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 SNORA12.1-201ENST00000390873 148 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.96□□□□□ -1.94
ERCC3P19447 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.96□□□□□ -1.94
ERCC3P19447 Y_RNA.714-201ENST00000517065 90 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.96□□□□□ -1.94
ERCC3P19447 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms