Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL161798.1-201ENST00000604630 131 ntBASIC-2.2□□□□□ -2.76
VCANP13611 MTND1P11-201ENST00000456661 876 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AC069431.2-201ENST00000604149 1099 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-2.21□□□□□ -2.76
VCANP13611 MIR340-201ENST00000362125 95 ntBASIC-2.21□□□□□ -2.76
VCANP13611 SNORD115-34-201ENST00000362441 82 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AC114491.1-201ENST00000416095 246 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-2.21□□□□□ -2.76
VCANP13611 AC090616.4-201ENST00000448026 115 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AC079416.3-201ENST00000624479 549 ntBASIC-2.21□□□□□ -2.76
VCANP13611 AC126544.2-201ENST00000625174 749 ntBASIC-2.21□□□□□ -2.76
VCANP13611 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.21□□□□□ -2.76
VCANP13611 RNU6-1010P-201ENST00000362757 107 ntBASIC-2.22□□□□□ -2.76
VCANP13611 MIR526A1-201ENST00000384897 85 ntBASIC-2.22□□□□□ -2.76
VCANP13611 RPL7P42-201ENST00000481005 679 ntBASIC-2.22□□□□□ -2.76
VCANP13611 MTCO3P15-201ENST00000526563 574 ntBASIC-2.22□□□□□ -2.76
VCANP13611 AL163152.1-201ENST00000642001 374 ntBASIC-2.22□□□□□ -2.76
VCANP13611 SNORA63.5-201ENST00000363548 123 ntBASIC-2.22□□□□□ -2.77
VCANP13611 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.22□□□□□ -2.77
VCANP13611 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.22□□□□□ -2.77
VCANP13611 RNU6-311P-201ENST00000516224 102 ntBASIC-2.22□□□□□ -2.77
VCANP13611 RNU6-685P-201ENST00000517088 95 ntBASIC-2.22□□□□□ -2.77
VCANP13611 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-2.22□□□□□ -2.77
VCANP13611 AC007919.1-201ENST00000429380 217 ntBASIC-2.23□□□□□ -2.77
VCANP13611 AL359672.1-201ENST00000442302 409 ntBASIC-2.23□□□□□ -2.77
VCANP13611 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-2.23□□□□□ -2.77
VCANP13611 VN1R83P-201ENST00000595685 445 ntBASIC-2.23□□□□□ -2.77
VCANP13611 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-2.23□□□□□ -2.77
VCANP13611 DLEU2_6.3-201ENST00000340052 136 ntBASIC-2.23□□□□□ -2.77
VCANP13611 MTCO3P41-201ENST00000414801 328 ntBASIC-2.23□□□□□ -2.77
VCANP13611 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-2.23□□□□□ -2.77
VCANP13611 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-2.23□□□□□ -2.77
VCANP13611 DLEU2_6.2-201ENST00000620994 136 ntBASIC-2.23□□□□□ -2.77
VCANP13611 MTATP6P17-201ENST00000431030 672 ntBASIC-2.23□□□□□ -2.77
VCANP13611 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-2.23□□□□□ -2.77
VCANP13611 AP000753.3-201ENST00000604083 169 ntBASIC-2.23□□□□□ -2.77
VCANP13611 PART1_1.1-201ENST00000611761 217 ntBASIC-2.23□□□□□ -2.77
VCANP13611 SNORA26.4-201ENST00000391188 123 ntBASIC-2.24□□□□□ -2.77
VCANP13611 CR383656.7-201ENST00000548164 174 ntBASIC-2.24□□□□□ -2.77
VCANP13611 AL139022.2-201ENST00000606934 443 ntBASIC-2.24□□□□□ -2.77
VCANP13611 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.24□□□□□ -2.77
VCANP13611 MIR548H3-201ENST00000408771 118 ntBASIC-2.24□□□□□ -2.77
VCANP13611 RNU6-1183P-201ENST00000517054 60 ntBASIC-2.24□□□□□ -2.77
VCANP13611 AC022217.4-201ENST00000604389 163 ntBASIC-2.24□□□□□ -2.77
VCANP13611 AL022154.1-201ENST00000604698 785 ntBASIC-2.24□□□□□ -2.77
VCANP13611 Y_RNA.265-201ENST00000364677 108 ntBASIC-2.24□□□□□ -2.77
VCANP13611 MIR1257-201ENST00000408490 117 ntBASIC-2.24□□□□□ -2.77
VCANP13611 Y_RNA.617-201ENST00000410920 90 ntBASIC-2.24□□□□□ -2.77
VCANP13611 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-2.24□□□□□ -2.77
VCANP13611 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.24□□□□□ -2.77
VCANP13611 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.24□□□□□ -2.77
VCANP13611 MTND1P37-201ENST00000636562 264 ntBASIC-2.24□□□□□ -2.77
VCANP13611 SNORD41.1-201ENST00000391000 69 ntBASIC-2.25□□□□□ -2.77
VCANP13611 AC084290.1-201ENST00000434995 374 ntBASIC-2.25□□□□□ -2.77
VCANP13611 SNORA59B-202ENST00000578183 701 ntBASIC-2.25□□□□□ -2.77
VCANP13611 snoU2-30.2-201ENST00000362805 70 ntBASIC-2.25□□□□□ -2.77
VCANP13611 AC245047.3-201ENST00000429428 127 ntBASIC-2.25□□□□□ -2.77
VCANP13611 AC093783.1-201ENST00000612976 329 ntBASIC-2.25□□□□□ -2.77
VCANP13611 AL589826.1-201ENST00000340697 249 ntBASIC-2.26□□□□□ -2.77
VCANP13611 SNORD114-13-201ENST00000364377 74 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AC097484.2-201ENST00000509147 251 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AC009994.1-201ENST00000606889 253 ntBASIC-2.26□□□□□ -2.77
VCANP13611 RNU6-207P-201ENST00000384137 107 ntBASIC-2.26□□□□□ -2.77
VCANP13611 RNU6-535P-201ENST00000384722 107 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AF186996.7-201ENST00000492781 209 ntBASIC-2.26□□□□□ -2.77
VCANP13611 MIR4490-201ENST00000582647 84 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AC063943.3-201ENST00000615562 356 ntBASIC-2.26□□□□□ -2.77
VCANP13611 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AC132825.7-201ENST00000638744 335 ntBASIC-2.26□□□□□ -2.77
VCANP13611 AC106883.1-201ENST00000418805 562 ntBASIC-2.27□□□□□ -2.77
VCANP13611 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-2.27□□□□□ -2.77
VCANP13611 SNORA74.3-201ENST00000517108 154 ntBASIC-2.27□□□□□ -2.77
VCANP13611 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-2.27□□□□□ -2.77
VCANP13611 RNU5F-2P-201ENST00000516066 82 ntBASIC-2.27□□□□□ -2.77
VCANP13611 RNU2-10P-201ENST00000516375 211 ntBASIC-2.27□□□□□ -2.77
VCANP13611 AL138960.2-201ENST00000625145 535 ntBASIC-2.27□□□□□ -2.77
VCANP13611 MIR19A-201ENST00000384878 82 ntBASIC-2.27□□□□□ -2.77
VCANP13611 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-2.27□□□□□ -2.77
VCANP13611 Y_RNA.32-201ENST00000362589 110 ntBASIC-2.28□□□□□ -2.77
VCANP13611 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-2.28□□□□□ -2.77
VCANP13611 AC020661.2-201ENST00000560114 134 ntBASIC-2.28□□□□□ -2.77
VCANP13611 MIR4308-201ENST00000580634 81 ntBASIC-2.28□□□□□ -2.77
VCANP13611 AC108747.1-201ENST00000609508 535 ntBASIC-2.28□□□□□ -2.77
VCANP13611 AL606517.1-201ENST00000446914 387 ntBASIC-2.29□□□□□ -2.78
VCANP13611 AC113420.1-201ENST00000507903 571 ntBASIC-2.29□□□□□ -2.78
VCANP13611 SNORD45.3-201ENST00000363836 72 ntBASIC-2.29□□□□□ -2.78
VCANP13611 AC098592.1-201ENST00000419352 333 ntBASIC-2.29□□□□□ -2.78
VCANP13611 AL353691.2-201ENST00000443795 59 ntBASIC-2.29□□□□□ -2.78
VCANP13611 MTND2P38-201ENST00000522536 667 ntBASIC-2.29□□□□□ -2.78
VCANP13611 AL606834.3-201ENST00000602615 496 ntBASIC-2.29□□□□□ -2.78
VCANP13611 OR4H6P-202ENST00000603819 340 ntBASIC-2.29□□□□□ -2.78
VCANP13611 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.29□□□□□ -2.78
VCANP13611 RNU6-730P-201ENST00000383954 104 ntBASIC-2.29□□□□□ -2.78
VCANP13611 BX119904.4-201ENST00000424402 301 ntBASIC-2.29□□□□□ -2.78
VCANP13611 Y_RNA.42-201ENST00000362660 108 ntBASIC-2.3□□□□□ -2.78
VCANP13611 RNU6-476P-201ENST00000384726 107 ntBASIC-2.3□□□□□ -2.78
VCANP13611 SNRPGP10-201ENST00000432323 225 ntBASIC-2.3□□□□□ -2.78
VCANP13611 RNY4P13-201ENST00000384284 96 ntBASIC-2.3□□□□□ -2.78
VCANP13611 MTATP6P13-201ENST00000438531 667 ntBASIC-2.3□□□□□ -2.78
VCANP13611 AC104996.3-201ENST00000590718 94 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms