Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
PCNAP12004 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
PCNAP12004 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
PCNAP12004 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
PCNAP12004 RNU6-514P-201ENST00000384208 107 ntBASIC1.77□□□□□ -2.13
PCNAP12004 Y_RNA.456-201ENST00000384232 111 ntBASIC1.77□□□□□ -2.13
PCNAP12004 RNU6-196P-201ENST00000384315 107 ntBASIC1.77□□□□□ -2.13
PCNAP12004 SNORA12.1-201ENST00000390873 148 ntBASIC1.77□□□□□ -2.13
PCNAP12004 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.77□□□□□ -2.13
PCNAP12004 RNU7-34P-201ENST00000459394 64 ntBASIC1.77□□□□□ -2.13
PCNAP12004 AC117454.1-201ENST00000491120 168 ntBASIC1.77□□□□□ -2.13
PCNAP12004 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
PCNAP12004 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.77□□□□□ -2.13
PCNAP12004 AL512605.2-201ENST00000592972 256 ntBASIC1.77□□□□□ -2.13
PCNAP12004 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.77□□□□□ -2.13
PCNAP12004 AC005972.2-201ENST00000604690 348 ntBASIC1.77□□□□□ -2.13
PCNAP12004 AC037487.3-201ENST00000606668 112 ntBASIC1.77□□□□□ -2.13
PCNAP12004 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.77□□□□□ -2.13
PCNAP12004 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCNAP12004 Y_RNA.144-201ENST00000363521 113 ntBASIC1.76□□□□□ -2.13
PCNAP12004 U8.7-201ENST00000364940 136 ntBASIC1.76□□□□□ -2.13
PCNAP12004 RNU6-1080P-201ENST00000383982 107 ntBASIC1.76□□□□□ -2.13
PCNAP12004 RNU6-763P-201ENST00000390865 106 ntBASIC1.76□□□□□ -2.13
PCNAP12004 RNU6-440P-201ENST00000390882 105 ntBASIC1.76□□□□□ -2.13
PCNAP12004 Y_RNA.621-201ENST00000411065 96 ntBASIC1.76□□□□□ -2.13
PCNAP12004 AC104332.1-201ENST00000440471 797 ntBASIC1.76□□□□□ -2.13
PCNAP12004 U8.19-201ENST00000459095 133 ntBASIC1.76□□□□□ -2.13
PCNAP12004 RNU6-341P-201ENST00000516973 96 ntBASIC1.76□□□□□ -2.13
PCNAP12004 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
PCNAP12004 AC136628.3-201ENST00000521868 290 ntBASIC1.76□□□□□ -2.13
PCNAP12004 AC110588.1-201ENST00000559699 137 ntBASIC1.76□□□□□ -2.13
PCNAP12004 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
PCNAP12004 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
PCNAP12004 AC012433.1-201ENST00000588916 398 ntBASIC1.76□□□□□ -2.13
PCNAP12004 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.76□□□□□ -2.13
PCNAP12004 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.75□□□□□ -2.13
PCNAP12004 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCNAP12004 Y_RNA.117-201ENST00000363294 101 ntBASIC1.75□□□□□ -2.13
PCNAP12004 SNORA72.4-201ENST00000384174 132 ntBASIC1.75□□□□□ -2.13
PCNAP12004 MTCO2P33-201ENST00000402100 465 ntBASIC1.75□□□□□ -2.13
PCNAP12004 MIR1302-3-201ENST00000408128 138 ntBASIC1.75□□□□□ -2.13
PCNAP12004 BTF3P11-201ENST00000426582 477 ntBASIC1.75□□□□□ -2.13
PCNAP12004 STAG3L5P-204ENST00000443759 179 ntBASIC1.75□□□□□ -2.13
PCNAP12004 snoU13.27-201ENST00000459278 104 ntBASIC1.75□□□□□ -2.13
PCNAP12004 RNU7-141P-201ENST00000459304 62 ntBASIC1.75□□□□□ -2.13
PCNAP12004 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
PCNAP12004 AC024405.2-202ENST00000532731 184 ntBASIC1.75□□□□□ -2.13
PCNAP12004 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
PCNAP12004 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
PCNAP12004 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
PCNAP12004 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.75□□□□□ -2.13
PCNAP12004 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
PCNAP12004 AC068700.1-201ENST00000565862 3754 ntBASIC1.74□□□□□ -2.13
PCNAP12004 Y_RNA.288-201ENST00000364854 92 ntBASIC1.74□□□□□ -2.13
PCNAP12004 MIR520G-201ENST00000385064 90 ntBASIC1.74□□□□□ -2.13
PCNAP12004 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PCNAP12004 RNU6-651P-201ENST00000411040 105 ntBASIC1.74□□□□□ -2.13
PCNAP12004 COX6CP10-201ENST00000416832 224 ntBASIC1.74□□□□□ -2.13
PCNAP12004 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
PCNAP12004 Y_RNA.637-201ENST00000459424 114 ntBASIC1.74□□□□□ -2.13
PCNAP12004 SNORA27.4-201ENST00000516650 95 ntBASIC1.74□□□□□ -2.13
PCNAP12004 RNU2-56P-201ENST00000516826 190 ntBASIC1.74□□□□□ -2.13
PCNAP12004 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
PCNAP12004 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
PCNAP12004 POLR3GP1-201ENST00000594073 261 ntBASIC1.74□□□□□ -2.13
PCNAP12004 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.74□□□□□ -2.13
PCNAP12004 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
PCNAP12004 AC100821.1-201ENST00000523153 2479 ntBASIC1.74□□□□□ -2.13
PCNAP12004 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PCNAP12004 SNORD114-1-201ENST00000362705 72 ntBASIC1.73□□□□□ -2.13
PCNAP12004 Y_RNA.193-201ENST00000363979 102 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RNU6-203P-201ENST00000384038 104 ntBASIC1.73□□□□□ -2.13
PCNAP12004 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
PCNAP12004 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
PCNAP12004 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.73□□□□□ -2.13
PCNAP12004 SNORD127-201ENST00000458892 86 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RPL36AP21-201ENST00000490372 323 ntBASIC1.73□□□□□ -2.13
PCNAP12004 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
PCNAP12004 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RNU1-41P-201ENST00000516161 162 ntBASIC1.73□□□□□ -2.13
PCNAP12004 Y_RNA.668-201ENST00000516233 93 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RNU1-48P-201ENST00000516400 162 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RNU7-115P-201ENST00000516433 55 ntBASIC1.73□□□□□ -2.13
PCNAP12004 RNA5SP481-201ENST00000516814 122 ntBASIC1.73□□□□□ -2.13
PCNAP12004 U2.14-201ENST00000615943 113 ntBASIC1.73□□□□□ -2.13
PCNAP12004 MIR548AY-201ENST00000617669 107 ntBASIC1.73□□□□□ -2.13
PCNAP12004 U4.1-201ENST00000620349 87 ntBASIC1.73□□□□□ -2.13
PCNAP12004 7SK.10-201ENST00000621414 298 ntBASIC1.73□□□□□ -2.13
PCNAP12004 U6.104-201ENST00000637979 90 ntBASIC1.73□□□□□ -2.13
PCNAP12004 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PCNAP12004 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
PCNAP12004 MIR335-201ENST00000362173 94 ntBASIC1.72□□□□□ -2.13
PCNAP12004 Y_RNA.44-201ENST00000362676 108 ntBASIC1.72□□□□□ -2.13
PCNAP12004 RNU6-1272P-201ENST00000362776 107 ntBASIC1.72□□□□□ -2.13
PCNAP12004 Y_RNA.217-201ENST00000364214 105 ntBASIC1.72□□□□□ -2.13
PCNAP12004 RNU6-740P-201ENST00000364734 105 ntBASIC1.72□□□□□ -2.13
PCNAP12004 RNU6-463P-201ENST00000384340 107 ntBASIC1.72□□□□□ -2.13
PCNAP12004 Y_RNA.477-201ENST00000384352 108 ntBASIC1.72□□□□□ -2.13
PCNAP12004 Y_RNA.518-201ENST00000384552 113 ntBASIC1.72□□□□□ -2.13
PCNAP12004 RNU6-1248P-201ENST00000391096 64 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms