Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORD11-201ENST00000459124 84 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 RNU2-34P-201ENST00000516534 121 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 AC025647.1-201ENST00000517879 253 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-1107P-201ENST00000364817 104 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-294P-201ENST00000364999 102 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 MIR1263-201ENST00000408324 86 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNA5SP274-201ENST00000410484 108 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AC008134.1-201ENST00000420943 193 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AC093259.1-201ENST00000509755 300 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNU1-143P-201ENST00000516296 146 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 SNORA18.4-201ENST00000516440 124 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AC007751.1-201ENST00000529260 376 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AC090115.4-201ENST00000609970 188 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 U1.23-201ENST00000610293 146 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNU1-68P-201ENST00000615382 146 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 U1.39-201ENST00000621562 146 ntBASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.81□□□□□ -1.8
CSB-PGBD3P0DP91 RNU4-13P-201ENST00000364019 141 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.203-201ENST00000364106 102 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.549-201ENST00000384657 102 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 MIR627-201ENST00000384979 97 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 MIR624-201ENST00000385217 97 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 SNORA12.1-201ENST00000390873 148 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 RNY4P29-201ENST00000410801 97 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 AL445687.1-201ENST00000439946 251 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 HMGN2P32-201ENST00000444648 269 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 AC245102.2-201ENST00000448956 180 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 AL021397.1-201ENST00000451806 248 ntBASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.8□□□□□ -1.8
CSB-PGBD3P0DP91 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-859P-201ENST00000362728 107 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.796-201ENST00000364268 102 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-1131P-201ENST00000364955 107 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.799-201ENST00000364992 102 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.332-201ENST00000365271 113 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-49P-201ENST00000384256 107 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 AC123900.1-201ENST00000420390 96 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-762P-201ENST00000517107 102 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-667P-201ENST00000517186 102 ntBASIC3.79□□□□□ -1.8
CSB-PGBD3P0DP91 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 FAM35CP-201ENST00000554755 2470 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 RNU1-112P-201ENST00000364401 164 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 SNORD72-201ENST00000390994 80 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 AL138827.1-201ENST00000402666 306 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 RNA5SP127-201ENST00000411051 133 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 AC010401.1-201ENST00000463867 348 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 AC008413.1-201ENST00000511864 177 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-412P-201ENST00000516434 106 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 RNU1-104P-201ENST00000517280 175 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 AP001318.4-201ENST00000616637 121 ntBASIC3.78□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-766P-201ENST00000362478 107 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.66-201ENST00000362862 102 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.85-201ENST00000363014 111 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-1209P-201ENST00000363655 107 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-1240P-201ENST00000365155 104 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.328-201ENST00000365208 113 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.486-201ENST00000384398 107 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA51.10-201ENST00000384418 136 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.528-201ENST00000384575 108 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 MIR562-201ENST00000384894 95 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 MIR592-201ENST00000384959 97 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AC016909.1-201ENST00000415916 166 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 CALM2P4-201ENST00000430810 426 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 RPS4XP11-201ENST00000446897 772 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AC018868.1-201ENST00000491307 315 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 RNU7-149P-201ENST00000516739 59 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AC007012.1-201ENST00000567192 175 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AL365205.2-201ENST00000594586 68 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 Pinc.1-201ENST00000616452 154 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 AC009831.4-201ENST00000620744 325 ntBASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.77□□□□□ -1.81
CSB-PGBD3P0DP91 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-756P-201ENST00000383997 107 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 SNORD12C-201ENST00000386307 89 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA26.2-201ENST00000390922 122 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 AF228730.3-201ENST00000436691 102 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 Z96811.1-201ENST00000445880 108 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 AL513328.1-201ENST00000446460 224 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA4.4-201ENST00000515921 135 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 RNA5SP236-201ENST00000516169 116 ntBASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
CSB-PGBD3P0DP91 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 Y_RNA.163-201ENST00000363702 113 ntBASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA1-201ENST00000384107 130 ntBASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 AL449363.1-201ENST00000617815 186 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms