Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-490P-201ENST00000362985 107 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.336-201ENST00000365307 109 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 SNORA80D-201ENST00000384488 135 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 MIR559-201ENST00000385188 96 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 RNU2-61P-201ENST00000411069 191 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 RPL23AP36-201ENST00000413895 458 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AC138393.2-201ENST00000414742 246 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AC096644.2-201ENST00000429278 159 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 HMGN1P7-201ENST00000491722 313 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AC005840.1-201ENST00000498412 377 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 UBL5P1-201ENST00000507979 193 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AL096861.1-201ENST00000610899 123 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 AL008636.1-201ENST00000625038 1018 ntBASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.142-201ENST00000363491 102 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.172-201ENST00000363765 102 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 U8.5-201ENST00000364528 136 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.387-201ENST00000383918 102 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-708P-201ENST00000384217 107 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 RNY4P36-201ENST00000391116 96 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 MRPL35P3-201ENST00000421557 364 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 TRMT112P2-201ENST00000512910 132 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-436P-201ENST00000516171 114 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-911P-201ENST00000516523 104 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 AC022616.4-201ENST00000522985 181 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 AC138305.3-201ENST00000624988 240 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 U6.92-201ENST00000636464 89 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
IGHV3-43DP0DP04 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.27-201ENST00000362540 103 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.230-201ENST00000364348 109 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.253-201ENST00000364562 112 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.338-201ENST00000365320 114 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.384-201ENST00000383909 102 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 MIR1298-201ENST00000408783 112 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 MLLT10P1-201ENST00000418346 262 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 RBMX2P4-201ENST00000441256 376 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 RPS20P10-201ENST00000451209 253 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-966P-201ENST00000516479 104 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-699P-201ENST00000517081 110 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 MIR4498-201ENST00000577599 66 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 MIR4762-201ENST00000585261 75 ntBASIC0.73□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.146-201ENST00000363549 102 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-1040P-201ENST00000383974 107 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 SNORD116-29-201ENST00000384516 83 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 MIR516B2-201ENST00000385190 85 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 SNORA75.2-201ENST00000391138 150 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 SNORA75.3-201ENST00000391231 150 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RPS26P48-201ENST00000491713 339 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC082651.2-201ENST00000496833 166 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 SNORA25.10-201ENST00000515926 124 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-277P-201ENST00000516272 106 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RN7SKP295-201ENST00000517264 153 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC006600.1-201ENST00000572529 153 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC005972.2-201ENST00000604690 348 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC022441.3-201ENST00000605737 136 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AC122108.2-201ENST00000611946 526 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 AL391903.3-201ENST00000612158 163 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 MIR1302-1-201ENST00000637932 143 ntBASIC0.72□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-1084P-201ENST00000362498 107 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.329-201ENST00000365209 107 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-969P-201ENST00000383900 105 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.390-201ENST00000383932 102 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.428-201ENST00000384078 102 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 MIR200A-201ENST00000384875 90 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 MIR522-201ENST00000385071 87 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-321P-201ENST00000410912 106 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-237P-201ENST00000515985 71 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.718-201ENST00000517110 102 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 VN1R91P-201ENST00000594377 169 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
IGHV3-43DP0DP04 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-1175P-201ENST00000365200 107 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 SNORA72-201ENST00000384339 132 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms