Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC027119.1-201ENST00000440877 241 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AC005840.1-201ENST00000498412 377 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AC015720.1-201ENST00000565251 277 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AC124312.5-201ENST00000604451 268 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AL365434.2-201ENST00000607979 234 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 SNORD3E-202ENST00000627253 216 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 AC134503.1-201ENST00000633048 54 ntBASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
RAB40ALP0C0E4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 MIR660-201ENST00000385235 97 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 RNU6-710P-201ENST00000410424 105 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 AL049830.1-201ENST00000468034 425 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 PART1_1.1-201ENST00000611761 217 ntBASIC1.42□□□□□ -2.18
RAB40ALP0C0E4 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RNA5SP482-201ENST00000391269 118 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 MIR548P-201ENST00000408336 84 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RNU4-30P-201ENST00000410245 143 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RNU6-130P-201ENST00000411112 103 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RNA5SP247-201ENST00000411181 105 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 SNX2P2-201ENST00000424553 323 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RPS4XP11-201ENST00000446897 772 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 AC022616.4-201ENST00000522985 181 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 AL358944.1-201ENST00000528537 144 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RAB40ALP0C0E4 AL391987.6-201ENST00000305671 199 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 RNU6-450P-201ENST00000364654 107 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 SNORA63.7-201ENST00000365579 123 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 SNORD63-201ENST00000384262 68 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 RNU6-424P-201ENST00000384367 105 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 RNU6-101P-201ENST00000410323 104 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 RNU6-855P-201ENST00000410395 104 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 CALM2P4-201ENST00000430810 426 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 OR9P1P-201ENST00000496431 281 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 RNA5SP168-201ENST00000516642 112 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 AC004832.4-201ENST00000608952 331 ntBASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RAB40ALP0C0E4 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 RNU4-76P-201ENST00000364509 141 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 RNU6-823P-201ENST00000391042 103 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 U8.16-201ENST00000391279 133 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 AC024067.1-201ENST00000426199 223 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 RNU6-397P-201ENST00000516226 104 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 DEFB117-201ENST00000602356 141 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.39□□□□□ -2.19
RAB40ALP0C0E4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 RNU4-41P-201ENST00000364426 143 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 SNORA22B-201ENST00000383876 138 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AL135790.2-201ENST00000437701 267 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 RPS20P10-201ENST00000451209 253 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AC011604.1-201ENST00000545978 196 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AC104695.3-201ENST00000604052 296 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AC005972.2-201ENST00000604690 348 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AL078604.3-201ENST00000615580 211 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RAB40ALP0C0E4 SNORD81.1-201ENST00000363064 77 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 POLR2KP2-201ENST00000438155 177 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 SEPT14P8-201ENST00000508026 178 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
RAB40ALP0C0E4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms