Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU4-73P-201ENST00000363164 141 ntBASIC1.17□□□□□ -2.22
VIMP08670 Y_RNA.315-201ENST00000365117 102 ntBASIC1.17□□□□□ -2.22
VIMP08670 RNU1-115P-201ENST00000365329 160 ntBASIC1.17□□□□□ -2.22
VIMP08670 Y_RNA.485-201ENST00000384395 102 ntBASIC1.17□□□□□ -2.22
VIMP08670 RNU6-1105P-201ENST00000384774 107 ntBASIC1.17□□□□□ -2.22
VIMP08670 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
VIMP08670 MIR1289-2-201ENST00000408360 111 ntBASIC1.17□□□□□ -2.22
VIMP08670 MTND1P14-201ENST00000427400 950 ntBASIC1.17□□□□□ -2.22
VIMP08670 AL160004.2-201ENST00000432935 350 ntBASIC1.17□□□□□ -2.22
VIMP08670 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
VIMP08670 AC005042.3-201ENST00000453230 174 ntBASIC1.17□□□□□ -2.22
VIMP08670 AC114811.1-201ENST00000507207 168 ntBASIC1.17□□□□□ -2.22
VIMP08670 RNU6-976P-201ENST00000516086 111 ntBASIC1.17□□□□□ -2.22
VIMP08670 MIR4423-201ENST00000580922 80 ntBASIC1.17□□□□□ -2.22
VIMP08670 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
VIMP08670 RPS29P30-201ENST00000600975 111 ntBASIC1.17□□□□□ -2.22
VIMP08670 AC005972.2-201ENST00000604690 348 ntBASIC1.17□□□□□ -2.22
VIMP08670 SNORD58B-201ENST00000607313 66 ntBASIC1.17□□□□□ -2.22
VIMP08670 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.17□□□□□ -2.22
VIMP08670 AL138825.1-201ENST00000618587 192 ntBASIC1.17□□□□□ -2.22
VIMP08670 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
VIMP08670 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
VIMP08670 Y_RNA.458-201ENST00000384240 102 ntBASIC1.16□□□□□ -2.22
VIMP08670 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
VIMP08670 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
VIMP08670 Y_RNA.579-201ENST00000390939 94 ntBASIC1.16□□□□□ -2.22
VIMP08670 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
VIMP08670 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
VIMP08670 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.16□□□□□ -2.22
VIMP08670 RPS20P10-201ENST00000451209 253 ntBASIC1.16□□□□□ -2.22
VIMP08670 SNORA40.14-201ENST00000516543 86 ntBASIC1.16□□□□□ -2.22
VIMP08670 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
VIMP08670 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
VIMP08670 Y_RNA.772-201ENST00000606692 102 ntBASIC1.16□□□□□ -2.22
VIMP08670 AC027279.3-201ENST00000625055 122 ntBASIC1.16□□□□□ -2.22
VIMP08670 U8.5-201ENST00000364528 136 ntBASIC1.15□□□□□ -2.23
VIMP08670 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
VIMP08670 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VIMP08670 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
VIMP08670 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
VIMP08670 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.15□□□□□ -2.23
VIMP08670 RN7SL429P-201ENST00000479090 223 ntBASIC1.15□□□□□ -2.23
VIMP08670 RN7SL489P-201ENST00000486185 223 ntBASIC1.15□□□□□ -2.23
VIMP08670 RN7SL327P-201ENST00000488659 223 ntBASIC1.15□□□□□ -2.23
VIMP08670 SNORA31.4-201ENST00000516049 129 ntBASIC1.15□□□□□ -2.23
VIMP08670 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
VIMP08670 AC022616.4-201ENST00000522985 181 ntBASIC1.15□□□□□ -2.23
VIMP08670 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.23
VIMP08670 AL121655.1-201ENST00000605811 308 ntBASIC1.15□□□□□ -2.23
VIMP08670 RN7SL853P-201ENST00000617250 223 ntBASIC1.15□□□□□ -2.23
VIMP08670 AL008636.1-201ENST00000625038 1018 ntBASIC1.15□□□□□ -2.23
VIMP08670 RNU4-79P-201ENST00000362764 141 ntBASIC1.14□□□□□ -2.23
VIMP08670 Y_RNA.331-201ENST00000365267 102 ntBASIC1.14□□□□□ -2.23
VIMP08670 Y_RNA.462-201ENST00000384268 102 ntBASIC1.14□□□□□ -2.23
VIMP08670 MIR1261-201ENST00000408659 82 ntBASIC1.14□□□□□ -2.23
VIMP08670 RNU6-855P-201ENST00000410395 104 ntBASIC1.14□□□□□ -2.23
VIMP08670 RPL23AP36-201ENST00000413895 458 ntBASIC1.14□□□□□ -2.23
VIMP08670 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
VIMP08670 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
VIMP08670 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
VIMP08670 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
VIMP08670 AC006157.1-201ENST00000611750 366 ntBASIC1.14□□□□□ -2.23
VIMP08670 SNORD81.1-201ENST00000363064 77 ntBASIC1.13□□□□□ -2.23
VIMP08670 Y_RNA.197-201ENST00000364004 102 ntBASIC1.13□□□□□ -2.23
VIMP08670 RNY1P14-201ENST00000384426 108 ntBASIC1.13□□□□□ -2.23
VIMP08670 MT-TD-201ENST00000387419 68 ntBASIC1.13□□□□□ -2.23
VIMP08670 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
VIMP08670 RNU6-710P-201ENST00000410424 105 ntBASIC1.13□□□□□ -2.23
VIMP08670 AL390729.2-201ENST00000416137 156 ntBASIC1.13□□□□□ -2.23
VIMP08670 MLLT10P1-201ENST00000418346 262 ntBASIC1.13□□□□□ -2.23
VIMP08670 RPL39P39-201ENST00000455840 151 ntBASIC1.13□□□□□ -2.23
VIMP08670 RNU7-110P-201ENST00000516891 62 ntBASIC1.13□□□□□ -2.23
VIMP08670 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.13□□□□□ -2.23
VIMP08670 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.13□□□□□ -2.23
VIMP08670 DEFB117-201ENST00000602356 141 ntBASIC1.13□□□□□ -2.23
VIMP08670 AC011373.1-201ENST00000607270 237 ntBASIC1.13□□□□□ -2.23
VIMP08670 SNORA72-201ENST00000384339 132 ntBASIC1.12□□□□□ -2.23
VIMP08670 MIR1298-201ENST00000408783 112 ntBASIC1.12□□□□□ -2.23
VIMP08670 LINC01399-202ENST00000458450 244 ntBASIC1.12□□□□□ -2.23
VIMP08670 AL117351.2-201ENST00000513571 157 ntBASIC1.12□□□□□ -2.23
VIMP08670 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
VIMP08670 DNAJC19P9-201ENST00000555084 351 ntBASIC1.12□□□□□ -2.23
VIMP08670 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
VIMP08670 Y_RNA.336-201ENST00000365307 109 ntBASIC1.11□□□□□ -2.23
VIMP08670 Y_RNA.341-201ENST00000365341 102 ntBASIC1.11□□□□□ -2.23
VIMP08670 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
VIMP08670 Y_RNA.439-201ENST00000384119 94 ntBASIC1.11□□□□□ -2.23
VIMP08670 RNU6-937P-201ENST00000384325 106 ntBASIC1.11□□□□□ -2.23
VIMP08670 MIR452-201ENST00000385020 85 ntBASIC1.11□□□□□ -2.23
VIMP08670 MIR522-201ENST00000385071 87 ntBASIC1.11□□□□□ -2.23
VIMP08670 AL590004.1-201ENST00000405321 300 ntBASIC1.11□□□□□ -2.23
VIMP08670 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
VIMP08670 AC108210.2-201ENST00000503681 201 ntBASIC1.11□□□□□ -2.23
VIMP08670 AL080274.1-201ENST00000605565 220 ntBASIC1.11□□□□□ -2.23
VIMP08670 AL133255.1-201ENST00000606374 441 ntBASIC1.11□□□□□ -2.23
VIMP08670 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
VIMP08670 AC007485.1-201ENST00000616755 206 ntBASIC1.11□□□□□ -2.23
VIMP08670 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VIMP08670 Y_RNA.143-201ENST00000363520 106 ntBASIC1.1□□□□□ -2.23
VIMP08670 SNORA7.1-201ENST00000363750 139 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms