Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL391903.3-201ENST00000612158 163 ntBASIC2.31□□□□□ -2.04
RHOP08100 U6.73-201ENST00000619194 103 ntBASIC2.31□□□□□ -2.04
RHOP08100 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.31□□□□□ -2.04
RHOP08100 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
RHOP08100 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
RHOP08100 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
RHOP08100 RNU1-96P-201ENST00000364163 162 ntBASIC2.3□□□□□ -2.04
RHOP08100 RNU6-275P-201ENST00000364910 107 ntBASIC2.3□□□□□ -2.04
RHOP08100 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
RHOP08100 MIR616-201ENST00000385293 97 ntBASIC2.3□□□□□ -2.04
RHOP08100 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
RHOP08100 RNA5SP181-201ENST00000410246 98 ntBASIC2.3□□□□□ -2.04
RHOP08100 SNORA36B-201ENST00000410438 131 ntBASIC2.3□□□□□ -2.04
RHOP08100 RNU5E-9P-201ENST00000411164 104 ntBASIC2.3□□□□□ -2.04
RHOP08100 HMGN2P34-201ENST00000437647 269 ntBASIC2.3□□□□□ -2.04
RHOP08100 MTND2P29-201ENST00000438595 412 ntBASIC2.3□□□□□ -2.04
RHOP08100 AL392103.1-201ENST00000447000 198 ntBASIC2.3□□□□□ -2.04
RHOP08100 AC011406.1-201ENST00000512440 370 ntBASIC2.3□□□□□ -2.04
RHOP08100 MIR4724-201ENST00000579485 89 ntBASIC2.3□□□□□ -2.04
RHOP08100 MIR6073-201ENST00000352083 89 ntBASIC2.29□□□□□ -2.04
RHOP08100 MIR367-201ENST00000362299 68 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNU6-674P-201ENST00000363831 107 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNU4-10P-201ENST00000364383 140 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNY1P5-201ENST00000383890 115 ntBASIC2.29□□□□□ -2.04
RHOP08100 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNU6-1135P-201ENST00000411083 103 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNU4-61P-201ENST00000411243 107 ntBASIC2.29□□□□□ -2.04
RHOP08100 AC091021.1-201ENST00000468051 388 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
RHOP08100 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
RHOP08100 RNU6-63P-201ENST00000516690 95 ntBASIC2.29□□□□□ -2.04
RHOP08100 Y_RNA.703-201ENST00000516846 111 ntBASIC2.29□□□□□ -2.04
RHOP08100 POLR3GP1-201ENST00000594073 261 ntBASIC2.29□□□□□ -2.04
RHOP08100 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
RHOP08100 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
RHOP08100 Y_RNA.24-201ENST00000362508 103 ntBASIC2.28□□□□□ -2.04
RHOP08100 Y_RNA.182-201ENST00000363880 111 ntBASIC2.28□□□□□ -2.04
RHOP08100 RNU6-969P-201ENST00000383900 105 ntBASIC2.28□□□□□ -2.04
RHOP08100 SNORA72-201ENST00000384339 132 ntBASIC2.28□□□□□ -2.04
RHOP08100 RNU6-160P-201ENST00000384591 107 ntBASIC2.28□□□□□ -2.04
RHOP08100 MIR1253-201ENST00000408273 105 ntBASIC2.28□□□□□ -2.04
RHOP08100 RNA5SP511-201ENST00000410487 115 ntBASIC2.28□□□□□ -2.04
RHOP08100 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RHOP08100 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.28□□□□□ -2.04
RHOP08100 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
RHOP08100 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
RHOP08100 RNU7-172P-201ENST00000517125 64 ntBASIC2.28□□□□□ -2.04
RHOP08100 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
RHOP08100 MIR3144-201ENST00000579460 79 ntBASIC2.28□□□□□ -2.04
RHOP08100 MIR4744-201ENST00000581563 82 ntBASIC2.28□□□□□ -2.04
RHOP08100 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
RHOP08100 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RHOP08100 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
RHOP08100 AC092881.1-201ENST00000638218 2733 ntBASIC2.28□□□□□ -2.04
RHOP08100 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
RHOP08100 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RHOP08100 Y_RNA.170-201ENST00000363746 110 ntBASIC2.27□□□□□ -2.05
RHOP08100 Y_RNA.229-201ENST00000364347 113 ntBASIC2.27□□□□□ -2.05
RHOP08100 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.27□□□□□ -2.05
RHOP08100 Y_RNA.572-201ENST00000384757 98 ntBASIC2.27□□□□□ -2.05
RHOP08100 RNU6-578P-201ENST00000390980 103 ntBASIC2.27□□□□□ -2.05
RHOP08100 Y_RNA.580-201ENST00000391004 95 ntBASIC2.27□□□□□ -2.05
RHOP08100 EBAG9P1-201ENST00000418955 543 ntBASIC2.27□□□□□ -2.05
RHOP08100 RNU6-437P-201ENST00000459408 95 ntBASIC2.27□□□□□ -2.05
RHOP08100 RNU7-128P-201ENST00000517247 62 ntBASIC2.27□□□□□ -2.05
RHOP08100 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.27□□□□□ -2.05
RHOP08100 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
RHOP08100 AC021753.1-201ENST00000635724 168 ntBASIC2.27□□□□□ -2.05
RHOP08100 MIR338-201ENST00000636369 67 ntBASIC2.27□□□□□ -2.05
RHOP08100 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RHOP08100 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RHOP08100 RNU4-13P-201ENST00000364019 141 ntBASIC2.26□□□□□ -2.05
RHOP08100 SNORD114-6-201ENST00000364393 72 ntBASIC2.26□□□□□ -2.05
RHOP08100 Y_RNA.506-201ENST00000384494 102 ntBASIC2.26□□□□□ -2.05
RHOP08100 RNU6-125P-201ENST00000384505 107 ntBASIC2.26□□□□□ -2.05
RHOP08100 RNU6-482P-201ENST00000391068 107 ntBASIC2.26□□□□□ -2.05
RHOP08100 AL117342.1-201ENST00000404861 406 ntBASIC2.26□□□□□ -2.05
RHOP08100 RN7SKP101-201ENST00000411376 320 ntBASIC2.26□□□□□ -2.05
RHOP08100 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
RHOP08100 RPL23AP54-201ENST00000495129 419 ntBASIC2.26□□□□□ -2.05
RHOP08100 SCARNA8-201ENST00000515924 131 ntBASIC2.26□□□□□ -2.05
RHOP08100 Y_RNA.797-201ENST00000515977 94 ntBASIC2.26□□□□□ -2.05
RHOP08100 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
RHOP08100 CYCSP26-201ENST00000534107 320 ntBASIC2.26□□□□□ -2.05
RHOP08100 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.26□□□□□ -2.05
RHOP08100 MIR3126-201ENST00000577443 74 ntBASIC2.26□□□□□ -2.05
RHOP08100 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
RHOP08100 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
RHOP08100 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
RHOP08100 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.26□□□□□ -2.05
RHOP08100 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
RHOP08100 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
RHOP08100 RNU4-84P-201ENST00000364200 139 ntBASIC2.25□□□□□ -2.05
RHOP08100 Y_RNA.272-201ENST00000364696 102 ntBASIC2.25□□□□□ -2.05
RHOP08100 RNU6-804P-201ENST00000384286 107 ntBASIC2.25□□□□□ -2.05
RHOP08100 MIR515-2-201ENST00000384883 83 ntBASIC2.25□□□□□ -2.05
RHOP08100 MIR515-1-201ENST00000384884 83 ntBASIC2.25□□□□□ -2.05
RHOP08100 RNU11-5P-201ENST00000391216 129 ntBASIC2.25□□□□□ -2.05
RHOP08100 MIR1278-201ENST00000408753 81 ntBASIC2.25□□□□□ -2.05
RHOP08100 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms