Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 MIR873-201ENST00000401120 77 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 AC092447.3-201ENST00000426027 686 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 AC104850.1-201ENST00000435940 476 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 AC010486.3-201ENST00000511602 785 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 RNU2-13P-201ENST00000515909 113 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 RNA5SP47-201ENST00000517230 109 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.68□□□□□ -2.52
TFF1P04155 MIR548AD-201ENST00000584780 82 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 AC018714.1-201ENST00000605028 208 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 U2.17-201ENST00000611454 95 ntBASIC-0.68□□□□□ -2.52
TFF1P04155 MIR410-201ENST00000362222 80 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 SNORD73A-201ENST00000386062 65 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU6-205P-201ENST00000390858 107 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU6-159P-201ENST00000391080 106 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 SNORA26-201ENST00000391286 122 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.69□□□□□ -2.52
TFF1P04155 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.69□□□□□ -2.52
TFF1P04155 AL365184.2-201ENST00000431139 435 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.69□□□□□ -2.52
TFF1P04155 U8.19-201ENST00000459095 133 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 U8.22-201ENST00000459141 133 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AC018710.1-201ENST00000506509 158 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU7-129P-201ENST00000516128 62 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU6-469P-201ENST00000516253 101 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU6-897P-201ENST00000517135 105 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AC125232.2-201ENST00000592457 143 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AC006566.1-201ENST00000608943 513 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AL139418.1-201ENST00000613613 177 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 AC006927.3-201ENST00000638789 384 ntBASIC-0.69□□□□□ -2.52
TFF1P04155 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 MTND4P32-201ENST00000437189 1237 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 RNU7-62P-201ENST00000458856 62 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 RNU7-156P-201ENST00000517214 74 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 CR383656.4-201ENST00000546909 122 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 AL158063.1-201ENST00000615349 536 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 MIR499B-201ENST00000636498 73 ntBASIC-0.7□□□□□ -2.52
TFF1P04155 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 SNORA51.10-201ENST00000384418 136 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 RNA5SP163-201ENST00000410304 99 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.71□□□□□ -2.52
TFF1P04155 AC084290.1-201ENST00000434995 374 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.71□□□□□ -2.52
TFF1P04155 RNU7-185P-201ENST00000459215 60 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 AC091959.1-201ENST00000495857 238 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 AP000811.1-201ENST00000603803 651 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 AC064836.2-201ENST00000609491 462 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 AC016597.2-201ENST00000613256 341 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.71□□□□□ -2.52
TFF1P04155 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
TFF1P04155 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 RNU6-407P-201ENST00000365280 104 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AC133104.1-201ENST00000429100 218 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.72□□□□□ -2.52
TFF1P04155 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AC022616.4-201ENST00000522985 181 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AC018448.1-201ENST00000552843 316 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 MIR5706-201ENST00000579841 80 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AL049777.1-201ENST00000622740 518 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 AL391099.1-201ENST00000624635 187 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 MTND1P7-201ENST00000632801 297 ntBASIC-0.72□□□□□ -2.52
TFF1P04155 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 RNY1P7-201ENST00000384743 110 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 MIR587-201ENST00000384845 96 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 MIR501-201ENST00000390204 84 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 MTCO2P33-201ENST00000402100 465 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 MIR1257-201ENST00000408490 117 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 AL512286.1-201ENST00000439244 400 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
TFF1P04155 MIR4263-201ENST00000584745 83 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 MIR4999-201ENST00000585029 91 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 AC121247.2-201ENST00000604776 136 ntBASIC-0.73□□□□□ -2.53
TFF1P04155 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.73□□□□□ -2.53
TFF1P04155 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 SNORA75.4-201ENST00000391278 119 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 SNX3P1X-201ENST00000414887 175 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.74□□□□□ -2.53
TFF1P04155 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.74□□□□□ -2.53
TFF1P04155 USP9YP12-201ENST00000450481 570 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 RNU6-329P-201ENST00000459618 107 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.74□□□□□ -2.53
TFF1P04155 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 RNU2-60P-201ENST00000517290 128 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.74□□□□□ -2.53
TFF1P04155 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.74□□□□□ -2.53
TFF1P04155 MIR4639-201ENST00000584938 69 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms