Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RNU6-271P-201ENST00000363858 105 ntBASIC1.64□□□□□ -2.15
RAF1P04049 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
RAF1P04049 RNU6-326P-201ENST00000365480 107 ntBASIC1.64□□□□□ -2.15
RAF1P04049 RNU6-321P-201ENST00000410912 106 ntBASIC1.64□□□□□ -2.15
RAF1P04049 EBAG9P1-201ENST00000418955 543 ntBASIC1.64□□□□□ -2.15
RAF1P04049 CST2P1-201ENST00000425770 87 ntBASIC1.64□□□□□ -2.15
RAF1P04049 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
RAF1P04049 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
RAF1P04049 SNORD127-201ENST00000458892 86 ntBASIC1.64□□□□□ -2.15
RAF1P04049 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
RAF1P04049 AC097462.1-201ENST00000514125 324 ntBASIC1.64□□□□□ -2.15
RAF1P04049 SERF1AP1-201ENST00000514575 187 ntBASIC1.64□□□□□ -2.15
RAF1P04049 SNORA70.12-201ENST00000516084 153 ntBASIC1.64□□□□□ -2.15
RAF1P04049 RNU6-191P-201ENST00000516295 94 ntBASIC1.64□□□□□ -2.15
RAF1P04049 RNU6-1337P-201ENST00000516525 95 ntBASIC1.64□□□□□ -2.15
RAF1P04049 RPL21P9-201ENST00000556149 474 ntBASIC1.64□□□□□ -2.15
RAF1P04049 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
RAF1P04049 U6.104-201ENST00000637979 90 ntBASIC1.64□□□□□ -2.15
RAF1P04049 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RAF1P04049 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
RAF1P04049 AL391987.6-201ENST00000305671 199 ntBASIC1.63□□□□□ -2.15
RAF1P04049 MIR335-201ENST00000362173 94 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU1-22P-201ENST00000363334 158 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-112P-201ENST00000363599 104 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-457P-201ENST00000363999 107 ntBASIC1.63□□□□□ -2.15
RAF1P04049 Y_RNA.288-201ENST00000364854 92 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-702P-201ENST00000364982 107 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-117P-201ENST00000365415 107 ntBASIC1.63□□□□□ -2.15
RAF1P04049 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RAF1P04049 SNORA53-201ENST00000391141 249 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-1186P-201ENST00000410429 97 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU2-38P-201ENST00000410856 79 ntBASIC1.63□□□□□ -2.15
RAF1P04049 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.63□□□□□ -2.15
RAF1P04049 AL135790.2-201ENST00000437701 267 ntBASIC1.63□□□□□ -2.15
RAF1P04049 RNU6-63P-201ENST00000516690 95 ntBASIC1.63□□□□□ -2.15
RAF1P04049 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.63□□□□□ -2.15
RAF1P04049 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.63□□□□□ -2.15
RAF1P04049 AC012433.1-201ENST00000588916 398 ntBASIC1.63□□□□□ -2.15
RAF1P04049 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.63□□□□□ -2.15
RAF1P04049 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RAF1P04049 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
RAF1P04049 RNU6-710P-201ENST00000410424 105 ntBASIC1.62□□□□□ -2.15
RAF1P04049 RNU2-7P-201ENST00000410794 178 ntBASIC1.62□□□□□ -2.15
RAF1P04049 BTF3P4-201ENST00000418852 495 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.62□□□□□ -2.15
RAF1P04049 HSPE1P13-201ENST00000451143 297 ntBASIC1.62□□□□□ -2.15
RAF1P04049 RNU6-1132P-201ENST00000459214 107 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.62□□□□□ -2.15
RAF1P04049 RNU7-99P-201ENST00000516271 62 ntBASIC1.62□□□□□ -2.15
RAF1P04049 RNU7-172P-201ENST00000517125 64 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.62□□□□□ -2.15
RAF1P04049 AC010900.2-201ENST00000604508 210 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.62□□□□□ -2.15
RAF1P04049 AL359075.3-201ENST00000613288 217 ntBASIC1.62□□□□□ -2.15
RAF1P04049 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
RAF1P04049 SNORA25.1-201ENST00000362326 128 ntBASIC1.61□□□□□ -2.15
RAF1P04049 Y_RNA.118-201ENST00000363300 101 ntBASIC1.61□□□□□ -2.15
RAF1P04049 RNU6-1019P-201ENST00000364424 107 ntBASIC1.61□□□□□ -2.15
RAF1P04049 Y_RNA.310-201ENST00000365063 113 ntBASIC1.61□□□□□ -2.15
RAF1P04049 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.61□□□□□ -2.15
RAF1P04049 SNORD116-13-201ENST00000384408 92 ntBASIC1.61□□□□□ -2.15
RAF1P04049 Y_RNA.508-201ENST00000384502 114 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AL627390.1-201ENST00000396055 340 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AC245047.4-201ENST00000433189 144 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AC091959.1-201ENST00000495857 238 ntBASIC1.61□□□□□ -2.15
RAF1P04049 RNU1-142P-201ENST00000516682 145 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AC004817.2-201ENST00000561794 651 ntBASIC1.61□□□□□ -2.15
RAF1P04049 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
RAF1P04049 AC062037.2-201ENST00000610137 73 ntBASIC1.61□□□□□ -2.15
RAF1P04049 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RAF1P04049 Y_RNA.14-201ENST00000362415 103 ntBASIC1.6□□□□□ -2.15
RAF1P04049 Y_RNA.368-201ENST00000365547 113 ntBASIC1.6□□□□□ -2.15
RAF1P04049 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
RAF1P04049 Y_RNA.562-201ENST00000384695 113 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MIR520A-201ENST00000384862 85 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MIR515-2-201ENST00000384883 83 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MIR515-1-201ENST00000384884 83 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MIR499A-201ENST00000384903 122 ntBASIC1.6□□□□□ -2.15
RAF1P04049 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
RAF1P04049 RNA5SP323-201ENST00000391094 133 ntBASIC1.6□□□□□ -2.15
RAF1P04049 RNU6-855P-201ENST00000410395 104 ntBASIC1.6□□□□□ -2.15
RAF1P04049 RNA5SP511-201ENST00000410487 115 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC024067.1-201ENST00000426199 223 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
RAF1P04049 RPS20P10-201ENST00000451209 253 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AL163195.1-201ENST00000496941 348 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MTND1P19-201ENST00000511780 315 ntBASIC1.6□□□□□ -2.15
RAF1P04049 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
RAF1P04049 SNORA27.4-201ENST00000516650 95 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC024995.1-201ENST00000523014 93 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.6□□□□□ -2.15
RAF1P04049 AC084364.2-201ENST00000546924 395 ntBASIC1.6□□□□□ -2.15
RAF1P04049 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC073413.2-201ENST00000604332 360 ntBASIC1.6□□□□□ -2.15
RAF1P04049 AC037487.3-201ENST00000606668 112 ntBASIC1.6□□□□□ -2.15
RAF1P04049 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
RAF1P04049 RNU6-801P-201ENST00000364087 105 ntBASIC1.59□□□□□ -2.15
RAF1P04049 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms