Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PCNPP3-201ENST00000393579 471 ntBASIC-0.31□□□□□ -2.46
APOEP02649 MTCO2P33-201ENST00000402100 465 ntBASIC-0.31□□□□□ -2.46
APOEP02649 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
APOEP02649 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOEP02649 MTND3P23-201ENST00000431980 347 ntBASIC-0.31□□□□□ -2.46
APOEP02649 SNRPGP10-201ENST00000432323 225 ntBASIC-0.31□□□□□ -2.46
APOEP02649 SUMO1P2-201ENST00000452524 304 ntBASIC-0.31□□□□□ -2.46
APOEP02649 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.31□□□□□ -2.46
APOEP02649 SNORA40.12-201ENST00000516329 111 ntBASIC-0.31□□□□□ -2.46
APOEP02649 AC009094.1-201ENST00000564443 426 ntBASIC-0.31□□□□□ -2.46
APOEP02649 SNORA36.1-201ENST00000363424 132 ntBASIC-0.32□□□□□ -2.46
APOEP02649 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.32□□□□□ -2.46
APOEP02649 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.32□□□□□ -2.46
APOEP02649 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.32□□□□□ -2.46
APOEP02649 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.32□□□□□ -2.46
APOEP02649 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.32□□□□□ -2.46
APOEP02649 SNORA26.8-201ENST00000391306 124 ntBASIC-0.32□□□□□ -2.46
APOEP02649 MIR938-201ENST00000401216 83 ntBASIC-0.32□□□□□ -2.46
APOEP02649 MTCO2P27-201ENST00000420740 428 ntBASIC-0.32□□□□□ -2.46
APOEP02649 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.32□□□□□ -2.46
APOEP02649 HMGN2P32-201ENST00000444648 269 ntBASIC-0.32□□□□□ -2.46
APOEP02649 MTND1P27-201ENST00000451117 902 ntBASIC-0.32□□□□□ -2.46
APOEP02649 AC010486.3-201ENST00000511602 785 ntBASIC-0.32□□□□□ -2.46
APOEP02649 RNU7-175P-201ENST00000515915 61 ntBASIC-0.32□□□□□ -2.46
APOEP02649 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.32□□□□□ -2.46
APOEP02649 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.32□□□□□ -2.46
APOEP02649 AC090897.1-201ENST00000580909 226 ntBASIC-0.32□□□□□ -2.46
APOEP02649 AP000753.3-201ENST00000604083 169 ntBASIC-0.32□□□□□ -2.46
APOEP02649 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.32□□□□□ -2.46
APOEP02649 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.32□□□□□ -2.46
APOEP02649 RNU6-125P-201ENST00000384505 107 ntBASIC-0.33□□□□□ -2.46
APOEP02649 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.33□□□□□ -2.46
APOEP02649 BTF3P11-201ENST00000426582 477 ntBASIC-0.33□□□□□ -2.46
APOEP02649 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.33□□□□□ -2.46
APOEP02649 MTND1P11-201ENST00000456661 876 ntBASIC-0.33□□□□□ -2.46
APOEP02649 AC083904.1-201ENST00000487828 231 ntBASIC-0.33□□□□□ -2.46
APOEP02649 MTND3P3-201ENST00000505004 126 ntBASIC-0.33□□□□□ -2.46
APOEP02649 ACA59.1-201ENST00000515966 143 ntBASIC-0.33□□□□□ -2.46
APOEP02649 MIR5696-201ENST00000578474 85 ntBASIC-0.33□□□□□ -2.46
APOEP02649 AC040904.1-201ENST00000590850 223 ntBASIC-0.33□□□□□ -2.46
APOEP02649 Z94722.1-201ENST00000604328 474 ntBASIC-0.33□□□□□ -2.46
APOEP02649 MIR6755-201ENST00000619993 66 ntBASIC-0.33□□□□□ -2.46
APOEP02649 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.34□□□□□ -2.46
APOEP02649 RNU6-95P-201ENST00000384697 107 ntBASIC-0.34□□□□□ -2.46
APOEP02649 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
APOEP02649 MIR517A-201ENST00000385001 87 ntBASIC-0.34□□□□□ -2.46
APOEP02649 MIR329-1-201ENST00000385028 80 ntBASIC-0.34□□□□□ -2.46
APOEP02649 MIR610-201ENST00000385139 96 ntBASIC-0.34□□□□□ -2.46
APOEP02649 AC092447.3-201ENST00000426027 686 ntBASIC-0.34□□□□□ -2.46
APOEP02649 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.34□□□□□ -2.46
APOEP02649 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.34□□□□□ -2.46
APOEP02649 AC125232.2-201ENST00000592457 143 ntBASIC-0.34□□□□□ -2.46
APOEP02649 MTND1P7-201ENST00000632801 297 ntBASIC-0.34□□□□□ -2.46
APOEP02649 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.47
APOEP02649 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.35□□□□□ -2.47
APOEP02649 SNORA51.10-201ENST00000384418 136 ntBASIC-0.35□□□□□ -2.47
APOEP02649 MIR593-201ENST00000384856 100 ntBASIC-0.35□□□□□ -2.47
APOEP02649 MIR644A-201ENST00000385262 94 ntBASIC-0.35□□□□□ -2.47
APOEP02649 MIR643-201ENST00000385267 97 ntBASIC-0.35□□□□□ -2.47
APOEP02649 USP9YP16-201ENST00000430287 407 ntBASIC-0.35□□□□□ -2.47
APOEP02649 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.35□□□□□ -2.47
APOEP02649 MTND3P16-201ENST00000452205 344 ntBASIC-0.35□□□□□ -2.47
APOEP02649 USP9YP23-201ENST00000455085 407 ntBASIC-0.35□□□□□ -2.47
APOEP02649 AC133485.4-201ENST00000561835 220 ntBASIC-0.35□□□□□ -2.47
APOEP02649 AC109347.2-201ENST00000610220 349 ntBASIC-0.35□□□□□ -2.47
APOEP02649 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.36□□□□□ -2.47
APOEP02649 RNU6-254P-201ENST00000363377 107 ntBASIC-0.36□□□□□ -2.47
APOEP02649 RNU6-128P-201ENST00000383976 107 ntBASIC-0.36□□□□□ -2.47
APOEP02649 RNU6-127P-201ENST00000390897 107 ntBASIC-0.36□□□□□ -2.47
APOEP02649 RNU6-131P-201ENST00000391144 107 ntBASIC-0.36□□□□□ -2.47
APOEP02649 RNU7-102P-201ENST00000458948 62 ntBASIC-0.36□□□□□ -2.47
APOEP02649 TRBVB-201ENST00000477100 408 ntBASIC-0.36□□□□□ -2.47
APOEP02649 AC018448.1-201ENST00000552843 316 ntBASIC-0.36□□□□□ -2.47
APOEP02649 uc_338.6-201ENST00000613544 171 ntBASIC-0.36□□□□□ -2.47
APOEP02649 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.36□□□□□ -2.47
APOEP02649 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
APOEP02649 MIR410-201ENST00000362222 80 ntBASIC-0.37□□□□□ -2.47
APOEP02649 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.37□□□□□ -2.47
APOEP02649 SNORA72.3-201ENST00000365074 132 ntBASIC-0.37□□□□□ -2.47
APOEP02649 RNU6-302P-201ENST00000365249 107 ntBASIC-0.37□□□□□ -2.47
APOEP02649 RNU6-514P-201ENST00000384208 107 ntBASIC-0.37□□□□□ -2.47
APOEP02649 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.37□□□□□ -2.47
APOEP02649 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.37□□□□□ -2.47
APOEP02649 MIR329-2-201ENST00000385029 84 ntBASIC-0.37□□□□□ -2.47
APOEP02649 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.37□□□□□ -2.47
APOEP02649 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOEP02649 MTATP6P13-201ENST00000438531 667 ntBASIC-0.37□□□□□ -2.47
APOEP02649 AC069271.1-201ENST00000445577 156 ntBASIC-0.37□□□□□ -2.47
APOEP02649 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.37□□□□□ -2.47
APOEP02649 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOEP02649 MIR4264-201ENST00000583520 66 ntBASIC-0.37□□□□□ -2.47
APOEP02649 SNORD114-7-201ENST00000362520 77 ntBASIC-0.38□□□□□ -2.47
APOEP02649 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.38□□□□□ -2.47
APOEP02649 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.38□□□□□ -2.47
APOEP02649 RNA5SP117-201ENST00000365294 118 ntBASIC-0.38□□□□□ -2.47
APOEP02649 RNU6-364P-201ENST00000384387 107 ntBASIC-0.38□□□□□ -2.47
APOEP02649 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.38□□□□□ -2.47
APOEP02649 RNU6-261P-201ENST00000459506 102 ntBASIC-0.38□□□□□ -2.47
APOEP02649 AC090617.3-201ENST00000573670 475 ntBASIC-0.38□□□□□ -2.47
APOEP02649 AC010525.2-201ENST00000590920 195 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms