Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL356157.2-201ENST00000605122 111 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.84□□□□□ -2.11
COL2A1P02458 RNU4-15P-201ENST00000362613 141 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNA5SP393-201ENST00000363423 117 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNU6-137P-201ENST00000363680 108 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 SNORA7.1-201ENST00000363750 139 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 SNORD113-1-201ENST00000365321 69 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 Y_RNA.343-201ENST00000365354 112 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 Y_RNA.441-201ENST00000384123 112 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNU6-19P-201ENST00000384718 107 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNA5SP390-201ENST00000410191 113 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNU6-257P-201ENST00000410238 98 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 AL162725.1-201ENST00000435405 301 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 AC245047.8-201ENST00000456455 284 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 RNU6-1211P-201ENST00000459179 105 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL2A1P02458 RNU6-561P-201ENST00000516222 102 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 AC022616.8-201ENST00000533569 253 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 CYP4A27P-201ENST00000567218 190 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.83□□□□□ -2.12
COL2A1P02458 AC006380.1-201ENST00000603598 186 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
COL2A1P02458 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL2A1P02458 Y_RNA.400-201ENST00000383963 111 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 SNORD20-201ENST00000384550 80 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU6-417P-201ENST00000384712 107 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 Y_RNA.568-201ENST00000384742 113 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU6-383P-201ENST00000410864 94 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.82□□□□□ -2.12
COL2A1P02458 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.82□□□□□ -2.12
COL2A1P02458 AC010099.1-201ENST00000455434 375 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC007215.1-201ENST00000464893 276 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC092991.1-201ENST00000477176 376 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU6-971P-201ENST00000516920 106 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC027419.1-201ENST00000522976 328 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC091152.3-201ENST00000604227 325 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC108706.1-201ENST00000611053 297 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 PCGEM1.1-201ENST00000613431 131 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC138915.1-201ENST00000565427 1685 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 MAPK10-266ENST00000641066 6555 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
COL2A1P02458 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL2A1P02458 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU4-11P-201ENST00000365287 132 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU6-1310P-201ENST00000384153 107 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 SNORD14D-201ENST00000384390 87 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 Y_RNA.586-201ENST00000391146 98 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RNU2-51P-201ENST00000410708 197 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC107626.1-201ENST00000471084 183 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC145146.1-201ENST00000496370 254 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.82□□□□□ -2.12
COL2A1P02458 RNU6-1007P-201ENST00000516586 107 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 SNORA31.24-201ENST00000517232 57 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 MIR5692C2-201ENST00000577959 77 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 MIR5194-201ENST00000582634 120 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 MIR3609-201ENST00000582661 80 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.82□□□□□ -2.12
COL2A1P02458 SNRPGP20-201ENST00000604477 205 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
COL2A1P02458 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL2A1P02458 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.81□□□□□ -2.12
COL2A1P02458 AC010329.5-201ENST00000623497 2174 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.81□□□□□ -2.12
COL2A1P02458 RNU4-84P-201ENST00000364200 139 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 Y_RNA.580-201ENST00000391004 95 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.81□□□□□ -2.12
COL2A1P02458 AL031183.1-201ENST00000457667 207 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 RNU6-62P-201ENST00000516526 102 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 RPPH1-2P-201ENST00000516688 293 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 RNU2-12P-201ENST00000517216 168 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.81□□□□□ -2.12
COL2A1P02458 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.81□□□□□ -2.12
COL2A1P02458 AC016256.1-201ENST00000547971 354 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.81□□□□□ -2.12
COL2A1P02458 RPS15AP11-201ENST00000594193 385 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 AL034555.1-201ENST00000604816 211 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 Y_RNA.778-201ENST00000620203 90 ntBASIC1.81□□□□□ -2.12
COL2A1P02458 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL2A1P02458 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
COL2A1P02458 RNY1P11-201ENST00000363759 113 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU1-42P-201ENST00000364033 160 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-1305P-201ENST00000364353 104 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU1-93P-201ENST00000364704 169 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 SNORD50.2-201ENST00000365465 70 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-969P-201ENST00000383900 105 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-44P-201ENST00000384045 107 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-198P-201ENST00000384258 104 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 Y_RNA.525-201ENST00000384570 113 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 Y_RNA.542-201ENST00000384641 111 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 MIR569-201ENST00000385228 96 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 MIR548B-201ENST00000385247 97 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms