Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RNU7-99P-201ENST00000516271 62 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RNU1-142P-201ENST00000516682 145 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPTM1O96005 MIR3128-201ENST00000581957 66 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 AP000942.4-201ENST00000604811 241 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 MIR7843-201ENST00000622274 79 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 RNA5SP432-201ENST00000362480 116 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.44-201ENST00000362676 108 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.60-201ENST00000362831 98 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.117-201ENST00000363294 101 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 SNORD27-201ENST00000363981 72 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.310-201ENST00000365063 113 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.350-201ENST00000365409 98 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.447-201ENST00000384184 113 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.562-201ENST00000384695 113 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AL603910.2-201ENST00000407268 136 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AL606517.2-201ENST00000442855 241 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 MTND4LP30-201ENST00000454092 297 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 Y_RNA.673-201ENST00000516306 88 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
CLPTM1O96005 AC015720.1-201ENST00000565251 277 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
CLPTM1O96005 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 AC068647.2-201ENST00000637380 353 ntBASIC1.62□□□□□ -2.15
CLPTM1O96005 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLPTM1O96005 ZNF355P-201ENST00000427301 3216 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
CLPTM1O96005 RNU6-1272P-201ENST00000362776 107 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 RNU6-801P-201ENST00000364087 105 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 RNU6-740P-201ENST00000364734 105 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 Y_RNA.277-201ENST00000364754 102 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 Y_RNA.368-201ENST00000365547 113 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 Y_RNA.456-201ENST00000384232 111 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 MIR515-2-201ENST00000384883 83 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 MIR515-1-201ENST00000384884 83 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 U8.13-201ENST00000390842 128 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 RNU6-763P-201ENST00000390865 106 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 SNORA26.5-201ENST00000391215 123 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 RNU6-651P-201ENST00000411040 105 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.61□□□□□ -2.15
CLPTM1O96005 BTF3P11-201ENST00000426582 477 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 AC091021.1-201ENST00000468051 388 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.61□□□□□ -2.15
CLPTM1O96005 SNORA27.4-201ENST00000516650 95 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 AC084364.2-201ENST00000546924 395 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
CLPTM1O96005 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.61□□□□□ -2.15
CLPTM1O96005 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CLPTM1O96005 AC134026.1-201ENST00000623249 2239 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 Y_RNA.217-201ENST00000364214 105 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RNU6-1019P-201ENST00000364424 107 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 Y_RNA.275-201ENST00000364726 110 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 Y_RNA.352-201ENST00000365439 102 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 Y_RNA.401-201ENST00000383965 117 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RNU6-1289P-201ENST00000384431 106 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RNU6-1248P-201ENST00000391096 64 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 MIR548H3-201ENST00000408771 118 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 AL162725.1-201ENST00000435405 301 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RPS4XP11-201ENST00000446897 772 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 Y_RNA.641-201ENST00000459414 105 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RPS26P45-201ENST00000471748 340 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RNU6-1291P-201ENST00000516591 104 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 RNA5SP437-201ENST00000517249 129 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 AC024995.1-201ENST00000523014 93 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLPTM1O96005 MIR4643-201ENST00000577473 78 ntBASIC1.6□□□□□ -2.15
CLPTM1O96005 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.6□□□□□ -2.15
CLPTM1O96005 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
CLPTM1O96005 AC018630.2-201ENST00000534866 2403 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 UBE2WP1-201ENST00000362030 340 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNU4-13P-201ENST00000364019 141 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 Y_RNA.416-201ENST00000384014 113 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 SNORA72.4-201ENST00000384174 132 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 MTCO2P33-201ENST00000402100 465 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AC104332.1-201ENST00000440471 797 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNU7-141P-201ENST00000459304 62 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNA5SP57-201ENST00000459463 123 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AC117454.1-201ENST00000491120 168 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RPL23AP63-201ENST00000498752 471 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AC107393.1-201ENST00000512403 346 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNA5SP182-201ENST00000516064 82 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNU6-1271P-201ENST00000517049 105 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 RNU6-1096P-201ENST00000517089 102 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AC136628.3-201ENST00000521868 290 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 MIR4524B-201ENST00000581569 115 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AC022217.4-201ENST00000604389 163 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 AL008718.3-201ENST00000610217 321 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
CLPTM1O96005 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
CLPTM1O96005 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CLPTM1O96005 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms