Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
RAB3DO95716 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RAB3DO95716 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RAB3DO95716 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 RNU6-192P-201ENST00000391253 100 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 Y_RNA.599-201ENST00000410489 109 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 AC096644.2-201ENST00000429278 159 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 FCF1P4-201ENST00000448326 183 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 RNU6-470P-201ENST00000515954 104 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 RNU6-436P-201ENST00000516171 114 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 AP003716.2-201ENST00000528260 108 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.63□□□□□ -2.31
RAB3DO95716 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.63□□□□□ -2.31
RAB3DO95716 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
RAB3DO95716 MIR6857-201ENST00000613267 93 ntBASIC0.63□□□□□ -2.31
RAB3DO95716 MIR103A2-201ENST00000362154 78 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 Y_RNA.166-201ENST00000363730 102 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 RNU6-1297P-201ENST00000384415 104 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 RNY3P4-201ENST00000384428 101 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 MIR520C-201ENST00000385005 87 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 MIR1185-1-201ENST00000408598 86 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 Y_RNA.605-201ENST00000410577 105 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.62□□□□□ -2.31
RAB3DO95716 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
RAB3DO95716 SNORA74.3-201ENST00000517108 154 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
RAB3DO95716 MIR4659A-201ENST00000580269 81 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 MIR5690-201ENST00000583739 73 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 AC139792.2-201ENST00000624218 587 ntBASIC0.62□□□□□ -2.31
RAB3DO95716 RNU6-1084P-201ENST00000362498 107 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 Y_RNA.248-201ENST00000364501 109 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AC117470.1-201ENST00000381974 330 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 Y_RNA.474-201ENST00000384341 102 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 MIR136-201ENST00000385207 82 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 SNRPGP10-201ENST00000432323 225 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.61□□□□□ -2.31
RAB3DO95716 CHEK2P4-201ENST00000450340 246 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 COX6CP14-201ENST00000469580 174 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AC144568.1-201ENST00000520139 137 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AC131055.1-201ENST00000584626 316 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AC138305.3-201ENST00000624988 240 ntBASIC0.61□□□□□ -2.31
RAB3DO95716 AL391987.6-201ENST00000305671 199 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 Y_RNA.146-201ENST00000363549 102 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 Y_RNA.314-201ENST00000365114 102 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 SNORD78.2-201ENST00000391076 69 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 AL163540.1-201ENST00000485382 386 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 PRDX4P1-201ENST00000507189 574 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 RNU7-4P-201ENST00000516961 62 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 MIR4764-201ENST00000580680 88 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 AC005972.2-201ENST00000604690 348 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 U2.1-201ENST00000618978 145 ntBASIC0.6□□□□□ -2.31
RAB3DO95716 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.6□□□□□ -2.31
RAB3DO95716 SNORD14.1-201ENST00000365609 90 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.31
RAB3DO95716 MTND1P2-201ENST00000430604 821 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 HMGN1P7-201ENST00000491722 313 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 RNU6-559P-201ENST00000516151 98 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 AC109810.1-201ENST00000534066 224 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 AC022306.2-201ENST00000617563 647 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 SEPT14P17-201ENST00000617978 177 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 MTND4LP32-201ENST00000636111 270 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 U6.92-201ENST00000636464 89 ntBASIC0.59□□□□□ -2.31
RAB3DO95716 MIR559-201ENST00000385188 96 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 MTCO2P27-201ENST00000420740 428 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 AC108667.1-201ENST00000428618 249 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.58□□□□□ -2.32
RAB3DO95716 Y_RNA.653-201ENST00000459091 95 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 SNORD123-201ENST00000459473 70 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 RN7SKP164-201ENST00000516138 266 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 AC022441.3-201ENST00000605737 136 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 AC092794.1-201ENST00000612734 582 ntBASIC0.58□□□□□ -2.32
RAB3DO95716 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
RAB3DO95716 snoU2-30.1-201ENST00000365012 70 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 SNORA72-201ENST00000384339 132 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6-482P-201ENST00000391068 107 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6-131P-201ENST00000391144 107 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6-855P-201ENST00000410395 104 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 Y_RNA.619-201ENST00000410951 90 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
RAB3DO95716 AL591806.2-201ENST00000433122 173 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 FABP5P4-201ENST00000437203 171 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms