Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 MIR196A1-201ENST00000388006 70 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.47□□□□□ -2.48
ABCA1O95477 MRPS10P1-201ENST00000448483 130 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
ABCA1O95477 MTCO3P38-201ENST00000468910 766 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 SNORA19.3-201ENST00000516165 130 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 Vault.3-201ENST00000516676 95 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AP001328.1-201ENST00000528550 176 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.47□□□□□ -2.48
ABCA1O95477 AC016597.2-201ENST00000613256 341 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU4-92P-201ENST00000363783 136 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-480P-201ENST00000384332 107 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-447P-201ENST00000410293 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-355P-201ENST00000410427 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-791P-201ENST00000410467 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-705P-201ENST00000410601 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-860P-201ENST00000410860 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-785P-201ENST00000411324 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AC109327.2-201ENST00000448339 378 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AC090617.3-201ENST00000573670 475 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AF250324.2-201ENST00000608299 610 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 HULC.1-201ENST00000612720 240 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 U6.90-201ENST00000614007 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.47□□□□□ -2.48
ABCA1O95477 AC104010.1-201ENST00000616889 150 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 AL158209.2-201ENST00000619266 216 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 U6.70-201ENST00000620287 104 ntBASIC-0.47□□□□□ -2.48
ABCA1O95477 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.47□□□□□ -2.48
ABCA1O95477 RNU6-501P-201ENST00000364072 100 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 U8.5-201ENST00000364528 136 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 SNORA20.2-201ENST00000383922 131 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU6-606P-201ENST00000384721 111 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 MIR587-201ENST00000384845 96 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 SNORD83B-201ENST00000386745 93 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 AC243428.1-201ENST00000421099 264 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 MRPS10P2-201ENST00000431226 381 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 MTATP6P14-201ENST00000455189 673 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU7-62P-201ENST00000458856 62 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 AC010486.3-201ENST00000511602 785 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.48□□□□□ -2.49
ABCA1O95477 SNORA25.14-201ENST00000516481 132 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.48□□□□□ -2.49
ABCA1O95477 MIR4775-201ENST00000581168 75 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 MIR3941-201ENST00000582572 103 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU6-726P-201ENST00000364680 107 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 MIR125B2-201ENST00000385128 89 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.48□□□□□ -2.49
ABCA1O95477 RNU4-21P-201ENST00000362802 126 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 SNORA1.2-201ENST00000365189 134 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.49□□□□□ -2.49
ABCA1O95477 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.49□□□□□ -2.49
ABCA1O95477 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.49□□□□□ -2.49
ABCA1O95477 MTND1P17-201ENST00000448961 204 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AC093303.1-201ENST00000514549 295 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR3682-201ENST00000581338 84 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR4263-201ENST00000584745 83 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AC005828.6-201ENST00000606610 232 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR4791-201ENST00000607666 84 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR499B-201ENST00000636498 73 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 RNU6-873P-201ENST00000363833 107 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 RNA5SP117-201ENST00000365294 118 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 SNORA24-201ENST00000384096 131 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR570-201ENST00000384917 97 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR501-201ENST00000390204 84 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 SNORD28B-201ENST00000390993 75 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR1257-201ENST00000408490 117 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MTND2P18-201ENST00000419962 1030 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.49□□□□□ -2.49
ABCA1O95477 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.49□□□□□ -2.49
ABCA1O95477 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.49□□□□□ -2.49
ABCA1O95477 AC010598.1-201ENST00000510378 103 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 RNU6-504P-201ENST00000516568 104 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AC022616.4-201ENST00000522985 181 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 MIR4639-201ENST00000584938 69 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AC012433.1-201ENST00000588916 398 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 AC022306.2-201ENST00000617563 647 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.49□□□□□ -2.49
ABCA1O95477 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 SNORA20B-201ENST00000384220 132 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 U8.17-201ENST00000391292 132 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 SNORA3B-201ENST00000391305 131 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 SNORD83.1-201ENST00000411362 77 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.5□□□□□ -2.49
ABCA1O95477 MLLT10P1-201ENST00000418346 262 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA1O95477 HMGN2P32-201ENST00000444648 269 ntBASIC-0.5□□□□□ -2.49
ABCA1O95477 AC016550.1-201ENST00000505348 785 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms