Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-1337P-201ENST00000516525 95 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 RNA5SP168-201ENST00000516642 112 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 RNU6-341P-201ENST00000516973 96 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 SNORD116.3-201ENST00000517176 78 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 MIR5188-201ENST00000583467 113 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 VN1R91P-201ENST00000594377 169 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 AC092447.9-201ENST00000603395 144 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CTDNEP1O95476 MIRLET7C-201ENST00000362160 84 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 Y_RNA.419-201ENST00000384041 102 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 Y_RNA.428-201ENST00000384078 102 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-1310P-201ENST00000384153 107 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 Y_RNA.446-201ENST00000384178 104 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-424P-201ENST00000384367 105 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-505P-201ENST00000384427 107 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-950P-201ENST00000384651 107 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU2-61P-201ENST00000411069 191 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.91□□□□□ -2.26
CTDNEP1O95476 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
CTDNEP1O95476 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.91□□□□□ -2.26
CTDNEP1O95476 Z98949.2-201ENST00000440996 144 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU7-94P-201ENST00000459576 63 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 AC010655.3-201ENST00000478818 450 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNU6-436P-201ENST00000516171 114 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 AL512310.8-201ENST00000550183 120 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 MIR4778-201ENST00000577635 80 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 AC005176.2-201ENST00000596933 147 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 AC073349.3-201ENST00000617616 186 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
CTDNEP1O95476 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
CTDNEP1O95476 SNORD114-7-201ENST00000362520 77 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 Y_RNA.238-201ENST00000364441 102 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 Y_RNA.458-201ENST00000384240 102 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RNY1P14-201ENST00000384426 108 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 Y_RNA.509-201ENST00000384506 99 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 MIR628-201ENST00000385229 95 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 MIR660-201ENST00000385235 97 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RNU11-5P-201ENST00000391216 129 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AL034345.1-201ENST00000407768 123 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AL354751.2-201ENST00000415471 210 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 MTND1P14-201ENST00000427400 950 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AC093850.1-201ENST00000454121 251 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.9□□□□□ -2.27
CTDNEP1O95476 SNORA25.10-201ENST00000515926 124 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RNU6-1096P-201ENST00000517089 102 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RNU6-165P-201ENST00000517170 99 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RNU6-1116P-201ENST00000517269 99 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 RPL21P9-201ENST00000556149 474 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 MIR4423-201ENST00000580922 80 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AL133255.1-201ENST00000606374 441 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AC007485.1-201ENST00000616755 206 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AL513423.1-201ENST00000621695 132 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 AC106754.2-201ENST00000623006 233 ntBASIC0.9□□□□□ -2.27
CTDNEP1O95476 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.89□□□□□ -2.27
CTDNEP1O95476 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CTDNEP1O95476 SNORD81.1-201ENST00000363064 77 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 Y_RNA.197-201ENST00000364004 102 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 RNU4-41P-201ENST00000364426 143 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 Y_RNA.570-201ENST00000384750 101 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 MIR1276-201ENST00000408707 83 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.89□□□□□ -2.27
CTDNEP1O95476 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.89□□□□□ -2.27
CTDNEP1O95476 RPS4XP11-201ENST00000446897 772 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 HSPE1P13-201ENST00000451143 297 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 RNU6-1278P-201ENST00000516130 107 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 RNU6-155P-201ENST00000516347 100 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 AL080274.1-201ENST00000605565 220 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 AC022441.3-201ENST00000605737 136 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 uc_338.22-201ENST00000622722 187 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 SNORD3E-202ENST00000627253 216 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 AL606534.2-204ENST00000635008 178 ntBASIC0.89□□□□□ -2.27
CTDNEP1O95476 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CTDNEP1O95476 Y_RNA.31-201ENST00000362574 102 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 Y_RNA.265-201ENST00000364677 108 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 RNU6-1175P-201ENST00000365200 107 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 RNU1-115P-201ENST00000365329 160 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 Y_RNA.394-201ENST00000383942 103 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 RNU6-130P-201ENST00000411112 103 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC236972.2-201ENST00000434979 310 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AL162725.1-201ENST00000435405 301 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 SUMO1P2-201ENST00000452524 304 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC233266.1-201ENST00000454518 96 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 RPL39P38-201ENST00000467018 153 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
CTDNEP1O95476 RNU6-976P-201ENST00000516086 111 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 RNU6-917P-201ENST00000516294 104 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AP002004.2-201ENST00000531656 154 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms