Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.26□□□□□ -2.37
SNX4O95219 DLGAP5P1-201ENST00000430307 464 ntBASIC0.26□□□□□ -2.37
SNX4O95219 MIR2115-201ENST00000516657 100 ntBASIC0.26□□□□□ -2.37
SNX4O95219 RNU1-54P-201ENST00000517181 120 ntBASIC0.26□□□□□ -2.37
SNX4O95219 MIR4251-201ENST00000635819 61 ntBASIC0.26□□□□□ -2.37
SNX4O95219 RNU6-454P-201ENST00000364292 107 ntBASIC0.25□□□□□ -2.37
SNX4O95219 snoU2-30.1-201ENST00000365012 70 ntBASIC0.25□□□□□ -2.37
SNX4O95219 MIR573-201ENST00000384964 99 ntBASIC0.25□□□□□ -2.37
SNX4O95219 RNU6-908P-201ENST00000410160 94 ntBASIC0.25□□□□□ -2.37
SNX4O95219 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.25□□□□□ -2.37
SNX4O95219 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
SNX4O95219 SNORD45.4-201ENST00000516629 73 ntBASIC0.25□□□□□ -2.37
SNX4O95219 AC015726.2-201ENST00000620112 122 ntBASIC0.25□□□□□ -2.37
SNX4O95219 AC091925.1-201ENST00000623204 462 ntBASIC0.25□□□□□ -2.37
SNX4O95219 SNORD114-26-201ENST00000363543 72 ntBASIC0.24□□□□□ -2.37
SNX4O95219 RNU6-879P-201ENST00000364328 108 ntBASIC0.24□□□□□ -2.37
SNX4O95219 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.24□□□□□ -2.37
SNX4O95219 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.24□□□□□ -2.37
SNX4O95219 AC105313.1-201ENST00000509121 353 ntBASIC0.24□□□□□ -2.37
SNX4O95219 Y_RNA.714-201ENST00000517065 90 ntBASIC0.24□□□□□ -2.37
SNX4O95219 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SNX4O95219 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.24□□□□□ -2.37
SNX4O95219 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.24□□□□□ -2.37
SNX4O95219 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
SNX4O95219 Y_RNA.168-201ENST00000363740 102 ntBASIC0.23□□□□□ -2.37
SNX4O95219 RNU6-654P-201ENST00000364373 107 ntBASIC0.23□□□□□ -2.37
SNX4O95219 RNU6-483P-201ENST00000384088 108 ntBASIC0.23□□□□□ -2.37
SNX4O95219 MIR193B-201ENST00000384907 83 ntBASIC0.23□□□□□ -2.37
SNX4O95219 MIR522-201ENST00000385071 87 ntBASIC0.23□□□□□ -2.37
SNX4O95219 RNU6-700P-201ENST00000391043 107 ntBASIC0.23□□□□□ -2.37
SNX4O95219 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.23□□□□□ -2.37
SNX4O95219 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.23□□□□□ -2.37
SNX4O95219 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.23□□□□□ -2.37
SNX4O95219 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.23□□□□□ -2.37
SNX4O95219 OSBPL9P5-201ENST00000542581 171 ntBASIC0.23□□□□□ -2.37
SNX4O95219 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.23□□□□□ -2.37
SNX4O95219 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SNX4O95219 Y_RNA.361-201ENST00000365515 120 ntBASIC0.22□□□□□ -2.37
SNX4O95219 MTND1P26-201ENST00000440488 538 ntBASIC0.22□□□□□ -2.37
SNX4O95219 AC092989.1-201ENST00000481235 277 ntBASIC0.22□□□□□ -2.37
SNX4O95219 AC019235.1-201ENST00000503847 207 ntBASIC0.22□□□□□ -2.37
SNX4O95219 RNU6-1337P-201ENST00000516525 95 ntBASIC0.22□□□□□ -2.37
SNX4O95219 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.22□□□□□ -2.37
SNX4O95219 AC005730.3-201ENST00000583067 366 ntBASIC0.22□□□□□ -2.37
SNX4O95219 MIR3611-201ENST00000584484 83 ntBASIC0.22□□□□□ -2.37
SNX4O95219 RN7SKP299-201ENST00000606679 301 ntBASIC0.22□□□□□ -2.37
SNX4O95219 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
SNX4O95219 RNY3P3-201ENST00000363816 102 ntBASIC0.21□□□□□ -2.38
SNX4O95219 RNU6-332P-201ENST00000391193 108 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MIR1302-7-201ENST00000408841 72 ntBASIC0.21□□□□□ -2.38
SNX4O95219 AL390729.2-201ENST00000416137 156 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MLLT10P1-201ENST00000418346 262 ntBASIC0.21□□□□□ -2.38
SNX4O95219 RNU7-87P-201ENST00000459343 62 ntBASIC0.21□□□□□ -2.38
SNX4O95219 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.21□□□□□ -2.38
SNX4O95219 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.21□□□□□ -2.38
SNX4O95219 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
SNX4O95219 SNORA40.9-201ENST00000515895 93 ntBASIC0.21□□□□□ -2.38
SNX4O95219 RNA5SP480-201ENST00000516840 109 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MIR5701-3-201ENST00000578890 82 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MIR5701-1-201ENST00000585138 82 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MIR5701-2-201ENST00000615634 82 ntBASIC0.21□□□□□ -2.38
SNX4O95219 MIR3974-201ENST00000637126 96 ntBASIC0.21□□□□□ -2.38
SNX4O95219 Y_RNA.253-201ENST00000364562 112 ntBASIC0.2□□□□□ -2.38
SNX4O95219 RNU6-396P-201ENST00000365369 105 ntBASIC0.2□□□□□ -2.38
SNX4O95219 Y_RNA.376-201ENST00000365638 108 ntBASIC0.2□□□□□ -2.38
SNX4O95219 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.2□□□□□ -2.38
SNX4O95219 AC010486.3-201ENST00000511602 785 ntBASIC0.2□□□□□ -2.38
SNX4O95219 MIR1273G-201ENST00000577677 100 ntBASIC0.2□□□□□ -2.38
SNX4O95219 RNU6-451P-201ENST00000362921 107 ntBASIC0.19□□□□□ -2.38
SNX4O95219 RNU6-1013P-201ENST00000384180 107 ntBASIC0.19□□□□□ -2.38
SNX4O95219 Y_RNA.557-201ENST00000384680 107 ntBASIC0.19□□□□□ -2.38
SNX4O95219 RNU6-131P-201ENST00000391144 107 ntBASIC0.19□□□□□ -2.38
SNX4O95219 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.19□□□□□ -2.38
SNX4O95219 USP9YP30-201ENST00000430729 455 ntBASIC0.19□□□□□ -2.38
SNX4O95219 Y_RNA.704-201ENST00000516851 102 ntBASIC0.19□□□□□ -2.38
SNX4O95219 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.19□□□□□ -2.38
SNX4O95219 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
SNX4O95219 RNU2-66P-201ENST00000410650 161 ntBASIC0.18□□□□□ -2.38
SNX4O95219 RNU6-373P-201ENST00000411247 98 ntBASIC0.18□□□□□ -2.38
SNX4O95219 SNORD5.1-201ENST00000458800 75 ntBASIC0.18□□□□□ -2.38
SNX4O95219 AC116353.2-201ENST00000505332 712 ntBASIC0.18□□□□□ -2.38
SNX4O95219 Y_RNA.670-201ENST00000516255 105 ntBASIC0.18□□□□□ -2.38
SNX4O95219 AL355375.2-201ENST00000574825 175 ntBASIC0.18□□□□□ -2.38
SNX4O95219 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SNX4O95219 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
SNX4O95219 MIR18A-201ENST00000362310 71 ntBASIC0.17□□□□□ -2.38
SNX4O95219 Y_RNA.48-201ENST00000362710 103 ntBASIC0.17□□□□□ -2.38
SNX4O95219 RNU2-70P-201ENST00000410718 179 ntBASIC0.17□□□□□ -2.38
SNX4O95219 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.17□□□□□ -2.38
SNX4O95219 RNU6-864P-201ENST00000516256 108 ntBASIC0.17□□□□□ -2.38
SNX4O95219 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
SNX4O95219 MIR1321-201ENST00000637766 79 ntBASIC0.17□□□□□ -2.38
SNX4O95219 RNY1P16-201ENST00000363063 111 ntBASIC0.16□□□□□ -2.38
SNX4O95219 RNU6-1059P-201ENST00000363752 98 ntBASIC0.16□□□□□ -2.38
SNX4O95219 RNU6-842P-201ENST00000384269 107 ntBASIC0.16□□□□□ -2.38
SNX4O95219 MIR520H-201ENST00000385126 88 ntBASIC0.16□□□□□ -2.38
SNX4O95219 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
SNX4O95219 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.16□□□□□ -2.38
SNX4O95219 RNU6-977P-201ENST00000516411 103 ntBASIC0.16□□□□□ -2.38
SNX4O95219 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms