Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.16□□□□□ -1.58
NPM3O75607 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NPM3O75607 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NPM3O75607 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.15□□□□□ -1.58
NPM3O75607 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPM3O75607 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPM3O75607 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
NPM3O75607 RNA5SP175-201ENST00000364275 119 ntBASIC5.15□□□□□ -1.59
NPM3O75607 RNU6-296P-201ENST00000384608 107 ntBASIC5.15□□□□□ -1.59
NPM3O75607 AL356095.1-201ENST00000417217 199 ntBASIC5.15□□□□□ -1.59
NPM3O75607 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NPM3O75607 RPS27P21-201ENST00000486977 252 ntBASIC5.15□□□□□ -1.59
NPM3O75607 SCARNA16.3-201ENST00000516595 184 ntBASIC5.15□□□□□ -1.59
NPM3O75607 SNORA18.5-201ENST00000516616 101 ntBASIC5.15□□□□□ -1.59
NPM3O75607 RNU6-850P-201ENST00000516934 103 ntBASIC5.15□□□□□ -1.59
NPM3O75607 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPM3O75607 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPM3O75607 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.14□□□□□ -1.59
NPM3O75607 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NPM3O75607 RNU1-94P-201ENST00000362627 173 ntBASIC5.14□□□□□ -1.59
NPM3O75607 RNU6-471P-201ENST00000383944 106 ntBASIC5.14□□□□□ -1.59
NPM3O75607 RNU6-571P-201ENST00000384128 107 ntBASIC5.14□□□□□ -1.59
NPM3O75607 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
NPM3O75607 RN7SL435P-201ENST00000584418 282 ntBASIC5.14□□□□□ -1.59
NPM3O75607 AC244505.7-201ENST00000599675 272 ntBASIC5.14□□□□□ -1.59
NPM3O75607 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NPM3O75607 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPM3O75607 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPM3O75607 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.14□□□□□ -1.59
NPM3O75607 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NPM3O75607 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPM3O75607 Y_RNA.596-201ENST00000410462 109 ntBASIC5.13□□□□□ -1.59
NPM3O75607 AC023790.1-201ENST00000482174 347 ntBASIC5.13□□□□□ -1.59
NPM3O75607 MIR4500-201ENST00000579472 76 ntBASIC5.13□□□□□ -1.59
NPM3O75607 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPM3O75607 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
NPM3O75607 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPM3O75607 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPM3O75607 IPO8P1-201ENST00000455509 3109 ntBASIC5.13□□□□□ -1.59
NPM3O75607 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPM3O75607 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NPM3O75607 SNORA37-201ENST00000384504 129 ntBASIC5.12□□□□□ -1.59
NPM3O75607 AC104332.2-201ENST00000429959 156 ntBASIC5.12□□□□□ -1.59
NPM3O75607 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.12□□□□□ -1.59
NPM3O75607 SNX18P1Y-201ENST00000616231 511 ntBASIC5.12□□□□□ -1.59
NPM3O75607 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
NPM3O75607 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.12□□□□□ -1.59
NPM3O75607 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPM3O75607 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.12□□□□□ -1.59
NPM3O75607 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPM3O75607 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 AP006437.1-201ENST00000641440 3685 ntBASIC5.11□□□□□ -1.59
NPM3O75607 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.11□□□□□ -1.59
NPM3O75607 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.11□□□□□ -1.59
NPM3O75607 RNU6-208P-201ENST00000362431 107 ntBASIC5.11□□□□□ -1.59
NPM3O75607 SNORD21-201ENST00000383953 95 ntBASIC5.11□□□□□ -1.59
NPM3O75607 RNU6-540P-201ENST00000384622 101 ntBASIC5.11□□□□□ -1.59
NPM3O75607 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NPM3O75607 RNA5SP292-201ENST00000390974 118 ntBASIC5.11□□□□□ -1.59
NPM3O75607 RNU2-7P-201ENST00000410794 178 ntBASIC5.11□□□□□ -1.59
NPM3O75607 RNA5SP246-201ENST00000458909 119 ntBASIC5.11□□□□□ -1.59
NPM3O75607 MIR3936-201ENST00000584304 110 ntBASIC5.11□□□□□ -1.59
NPM3O75607 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.11□□□□□ -1.59
NPM3O75607 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPM3O75607 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPM3O75607 MIR548U-201ENST00000390728 81 ntBASIC5.1□□□□□ -1.59
NPM3O75607 AC015818.7-201ENST00000428754 109 ntBASIC5.1□□□□□ -1.59
NPM3O75607 AC093423.1-201ENST00000440817 142 ntBASIC5.1□□□□□ -1.59
NPM3O75607 AC108751.2-201ENST00000469993 231 ntBASIC5.1□□□□□ -1.59
NPM3O75607 RNA5SP519-201ENST00000516480 119 ntBASIC5.1□□□□□ -1.59
NPM3O75607 RNA5SP360-201ENST00000516555 118 ntBASIC5.1□□□□□ -1.59
NPM3O75607 MIR4709-201ENST00000577272 72 ntBASIC5.1□□□□□ -1.59
NPM3O75607 MIR6867-201ENST00000610636 67 ntBASIC5.1□□□□□ -1.59
NPM3O75607 AC021506.2-201ENST00000612354 169 ntBASIC5.1□□□□□ -1.59
NPM3O75607 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPM3O75607 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPM3O75607 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.09□□□□□ -1.59
NPM3O75607 SPRR2C-201ENST00000290702 219 ntBASIC5.09□□□□□ -1.59
NPM3O75607 AC017083.1-201ENST00000428093 483 ntBASIC5.09□□□□□ -1.59
NPM3O75607 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPM3O75607 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NPM3O75607 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPM3O75607 RNU1-18P-201ENST00000363062 164 ntBASIC5.08□□□□□ -1.6
NPM3O75607 RNU6-461P-201ENST00000364195 107 ntBASIC5.08□□□□□ -1.6
NPM3O75607 RNU6-949P-201ENST00000384040 107 ntBASIC5.08□□□□□ -1.6
NPM3O75607 MIR520A-201ENST00000384862 85 ntBASIC5.08□□□□□ -1.6
NPM3O75607 MIR520H-201ENST00000385126 88 ntBASIC5.08□□□□□ -1.6
NPM3O75607 MIR154-201ENST00000385243 84 ntBASIC5.08□□□□□ -1.6
NPM3O75607 HSPE1P24-201ENST00000450782 238 ntBASIC5.08□□□□□ -1.6
NPM3O75607 MIR4764-201ENST00000580680 88 ntBASIC5.08□□□□□ -1.6
NPM3O75607 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.08□□□□□ -1.6
NPM3O75607 AC104996.3-201ENST00000590718 94 ntBASIC5.08□□□□□ -1.6
NPM3O75607 AL662814.1-201ENST00000617364 121 ntBASIC5.08□□□□□ -1.6
NPM3O75607 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPM3O75607 AC010300.1-201ENST00000600671 5134 ntBASIC5.08□□□□□ -1.6
NPM3O75607 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms