Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
BRD4O60885 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.56□□□□□ -2.32
BRD4O60885 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC018448.1-201ENST00000552843 316 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC091178.2-201ENST00000584401 117 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC018462.2-201ENST00000605375 395 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC242852.1-201ENST00000612151 96 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC244015.1-201ENST00000622301 99 ntBASIC0.56□□□□□ -2.32
BRD4O60885 AC005592.1-201ENST00000566527 1640 ntBASIC0.55□□□□□ -2.32
BRD4O60885 SNORA1B-201ENST00000362535 133 ntBASIC0.55□□□□□ -2.32
BRD4O60885 RNU6-593P-201ENST00000364716 112 ntBASIC0.55□□□□□ -2.32
BRD4O60885 RNU6-1310P-201ENST00000384153 107 ntBASIC0.55□□□□□ -2.32
BRD4O60885 SNORA80D-201ENST00000384488 135 ntBASIC0.55□□□□□ -2.32
BRD4O60885 Y_RNA.549-201ENST00000384657 102 ntBASIC0.55□□□□□ -2.32
BRD4O60885 RNU6-136P-201ENST00000384663 107 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MIR329-2-201ENST00000385029 84 ntBASIC0.55□□□□□ -2.32
BRD4O60885 SNORD115-47-201ENST00000391226 86 ntBASIC0.55□□□□□ -2.32
BRD4O60885 AC018865.2-201ENST00000423631 129 ntBASIC0.55□□□□□ -2.32
BRD4O60885 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.55□□□□□ -2.32
BRD4O60885 LINC01399-202ENST00000458450 244 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MTND5P5-201ENST00000503764 376 ntBASIC0.55□□□□□ -2.32
BRD4O60885 AC022493.2-201ENST00000506122 481 ntBASIC0.55□□□□□ -2.32
BRD4O60885 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.55□□□□□ -2.32
BRD4O60885 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.55□□□□□ -2.32
BRD4O60885 AC026782.1-201ENST00000512952 449 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MIR5701-3-201ENST00000578890 82 ntBASIC0.55□□□□□ -2.32
BRD4O60885 AC005899.2-201ENST00000584353 90 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MIR5701-1-201ENST00000585138 82 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MIR5701-2-201ENST00000615634 82 ntBASIC0.55□□□□□ -2.32
BRD4O60885 PISRT1.1-201ENST00000616930 107 ntBASIC0.55□□□□□ -2.32
BRD4O60885 U6.115-201ENST00000636045 103 ntBASIC0.55□□□□□ -2.32
BRD4O60885 MIR3688-2-201ENST00000636963 87 ntBASIC0.55□□□□□ -2.32
BRD4O60885 RNU4-67P-201ENST00000364569 141 ntBASIC0.54□□□□□ -2.32
BRD4O60885 Y_RNA.358-201ENST00000365491 99 ntBASIC0.54□□□□□ -2.32
BRD4O60885 MIR520G-201ENST00000385064 90 ntBASIC0.54□□□□□ -2.32
BRD4O60885 Y_RNA.594-201ENST00000410373 140 ntBASIC0.54□□□□□ -2.32
BRD4O60885 RPL23AP50-201ENST00000434149 455 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AL137792.2-201ENST00000443484 235 ntBASIC0.54□□□□□ -2.32
BRD4O60885 SUMO1P2-201ENST00000452524 304 ntBASIC0.54□□□□□ -2.32
BRD4O60885 RNU6-625P-201ENST00000459412 107 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.54□□□□□ -2.32
BRD4O60885 RNU4-57P-201ENST00000515980 135 ntBASIC0.54□□□□□ -2.32
BRD4O60885 SNORD79.1-201ENST00000516069 84 ntBASIC0.54□□□□□ -2.32
BRD4O60885 RNU6-917P-201ENST00000516294 104 ntBASIC0.54□□□□□ -2.32
BRD4O60885 RNU6-1291P-201ENST00000516591 104 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AC022868.1-201ENST00000517767 391 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AL358944.1-201ENST00000528537 144 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.54□□□□□ -2.32
BRD4O60885 AC018638.8-201ENST00000588755 281 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AC125232.2-201ENST00000592457 143 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AC005014.2-201ENST00000607795 599 ntBASIC0.54□□□□□ -2.32
BRD4O60885 AC090517.2-201ENST00000614966 680 ntBASIC0.54□□□□□ -2.32
BRD4O60885 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
BRD4O60885 MIR3674-201ENST00000636576 68 ntBASIC0.54□□□□□ -2.32
BRD4O60885 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.53□□□□□ -2.32
BRD4O60885 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.53□□□□□ -2.32
BRD4O60885 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
BRD4O60885 Y_RNA.473-201ENST00000384333 102 ntBASIC0.53□□□□□ -2.32
BRD4O60885 RNU6-1215P-201ENST00000384441 102 ntBASIC0.53□□□□□ -2.32
BRD4O60885 MIR873-201ENST00000401120 77 ntBASIC0.53□□□□□ -2.32
BRD4O60885 MIR891A-201ENST00000401237 79 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AC104332.1-201ENST00000440471 797 ntBASIC0.53□□□□□ -2.32
BRD4O60885 Z98949.2-201ENST00000440996 144 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.53□□□□□ -2.32
BRD4O60885 AC107399.1-201ENST00000451226 265 ntBASIC0.53□□□□□ -2.32
BRD4O60885 RPS29P25-201ENST00000481709 171 ntBASIC0.53□□□□□ -2.32
BRD4O60885 RNU6-1016P-201ENST00000516689 94 ntBASIC0.53□□□□□ -2.32
BRD4O60885 RNU6-307P-201ENST00000516743 106 ntBASIC0.53□□□□□ -2.32
BRD4O60885 Y_RNA.708-201ENST00000516950 96 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AC105029.1-201ENST00000520250 669 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AP002001.1-203ENST00000534002 267 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AC080078.2-201ENST00000603766 501 ntBASIC0.53□□□□□ -2.32
BRD4O60885 AL357075.2-201ENST00000614906 189 ntBASIC0.53□□□□□ -2.32
BRD4O60885 MIR410-201ENST00000362222 80 ntBASIC0.52□□□□□ -2.33
BRD4O60885 Y_RNA.86-201ENST00000363020 111 ntBASIC0.52□□□□□ -2.33
BRD4O60885 Y_RNA.482-201ENST00000384377 111 ntBASIC0.52□□□□□ -2.33
BRD4O60885 Y_RNA.516-201ENST00000384541 124 ntBASIC0.52□□□□□ -2.33
BRD4O60885 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
BRD4O60885 SNORD41-201ENST00000386967 70 ntBASIC0.52□□□□□ -2.33
BRD4O60885 AC092423.1-201ENST00000430165 186 ntBASIC0.52□□□□□ -2.33
BRD4O60885 AL353997.1-201ENST00000432936 108 ntBASIC0.52□□□□□ -2.33
BRD4O60885 RPS3AP52-201ENST00000435639 297 ntBASIC0.52□□□□□ -2.33
BRD4O60885 TRBVB-201ENST00000477100 408 ntBASIC0.52□□□□□ -2.33
BRD4O60885 RNU6-1096P-201ENST00000517089 102 ntBASIC0.52□□□□□ -2.33
BRD4O60885 MIR2355-201ENST00000517199 87 ntBASIC0.52□□□□□ -2.33
BRD4O60885 AF235103.2-201ENST00000525753 346 ntBASIC0.52□□□□□ -2.33
BRD4O60885 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.52□□□□□ -2.33
BRD4O60885 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.52□□□□□ -2.33
BRD4O60885 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.52□□□□□ -2.33
BRD4O60885 AC002553.4-201ENST00000616896 331 ntBASIC0.52□□□□□ -2.33
BRD4O60885 AC092794.2-201ENST00000620933 563 ntBASIC0.52□□□□□ -2.33
BRD4O60885 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.52□□□□□ -2.33
BRD4O60885 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
BRD4O60885 SNORD114-7-201ENST00000362520 77 ntBASIC0.51□□□□□ -2.33
BRD4O60885 RNU6-833P-201ENST00000363486 107 ntBASIC0.51□□□□□ -2.33
BRD4O60885 RNA5SP331-201ENST00000364986 107 ntBASIC0.51□□□□□ -2.33
BRD4O60885 Y_RNA.318-201ENST00000365131 97 ntBASIC0.51□□□□□ -2.33
BRD4O60885 RNU6-163P-201ENST00000384396 106 ntBASIC0.51□□□□□ -2.33
BRD4O60885 RNU6-601P-201ENST00000384540 107 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms