Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-341P-201ENST00000516973 96 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.44□□□□□ -2.02
KDM1AO60341 AL929325.1-201ENST00000603096 117 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 CTSLP2-204ENST00000629029 392 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 snoU2_19.4-201ENST00000364329 80 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 Y_RNA.238-201ENST00000364441 102 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 Y_RNA.572-201ENST00000384757 98 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KDM1AO60341 RNU2-2P-201ENST00000410396 191 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 RNU6-383P-201ENST00000410864 94 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 RNU6-1291P-201ENST00000516591 104 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 MIR5094-201ENST00000578766 85 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 RNU2-4P-201ENST00000606190 192 ntBASIC2.43□□□□□ -2.02
KDM1AO60341 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
KDM1AO60341 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
KDM1AO60341 RNU6-103P-201ENST00000363686 107 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 Y_RNA.203-201ENST00000364106 102 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 Y_RNA.229-201ENST00000364347 113 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 RNU6-886P-201ENST00000384319 105 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 RNU7-193P-201ENST00000516723 65 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 SNORA31.25-201ENST00000517242 134 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.42□□□□□ -2.02
KDM1AO60341 AL391903.3-201ENST00000612158 163 ntBASIC2.42□□□□□ -2.02
KDM1AO60341 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 Y_RNA.267-201ENST00000364679 109 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 Y_RNA.500-201ENST00000384466 111 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 MIR616-201ENST00000385293 97 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 PCNPP3-201ENST00000393579 471 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 Y_RNA.621-201ENST00000411065 96 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AL513328.1-201ENST00000446460 224 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AC108938.1-201ENST00000451204 136 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AC233266.1-201ENST00000454518 96 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AC079804.2-201ENST00000490376 200 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 RNU6-1219P-201ENST00000516143 112 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 RNA5SP320-201ENST00000516263 124 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AC242852.1-201ENST00000612151 96 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 AC244015.1-201ENST00000622301 99 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 U6.106-201ENST00000636360 105 ntBASIC2.41□□□□□ -2.02
KDM1AO60341 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
KDM1AO60341 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
KDM1AO60341 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
KDM1AO60341 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
KDM1AO60341 Y_RNA.180-201ENST00000363867 113 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 RNU4-41P-201ENST00000364426 143 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 RNU6-301P-201ENST00000384277 107 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 MTND2P29-201ENST00000438595 412 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 AC069257.2-201ENST00000441819 155 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 RPS27P21-201ENST00000486977 252 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 AL358944.1-201ENST00000528537 144 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.4□□□□□ -2.03
KDM1AO60341 AP002004.2-201ENST00000531656 154 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
KDM1AO60341 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
KDM1AO60341 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
KDM1AO60341 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.39□□□□□ -2.03
KDM1AO60341 Y_RNA.182-201ENST00000363880 111 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 Y_RNA.240-201ENST00000364469 95 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 RNA5SP496-201ENST00000391240 109 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AL512604.1-201ENST00000404812 257 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 RN7SKP101-201ENST00000411376 320 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AC245047.4-201ENST00000433189 144 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AC245047.8-201ENST00000456455 284 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 Y_RNA.662-201ENST00000516028 97 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 RNVU1-2-201ENST00000516326 135 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AC084364.2-201ENST00000546924 395 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 MIR2681-201ENST00000581814 105 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AC022217.4-201ENST00000604389 163 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AL021707.8-201ENST00000609428 183 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 MIR6852-201ENST00000621699 66 ntBASIC2.39□□□□□ -2.03
KDM1AO60341 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.38□□□□□ -2.03
KDM1AO60341 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
KDM1AO60341 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KDM1AO60341 RNU6-1080P-201ENST00000383982 107 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 RNA5SP450-201ENST00000411206 102 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KDM1AO60341 AC245047.3-201ENST00000429428 127 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 RPS27P1-201ENST00000450552 247 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.38□□□□□ -2.03
KDM1AO60341 SCARNA8-201ENST00000515924 131 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 Y_RNA.797-201ENST00000515977 94 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 RNU6-1007P-201ENST00000516586 107 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 MIR4744-201ENST00000581563 82 ntBASIC2.38□□□□□ -2.03
KDM1AO60341 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
KDM1AO60341 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KDM1AO60341 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KDM1AO60341 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 Y_RNA.75-201ENST00000362927 97 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 Y_RNA.412-201ENST00000384001 104 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 RNA5SP109-201ENST00000391010 116 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 MIR1278-201ENST00000408753 81 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 AL606517.2-201ENST00000442855 241 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 RNU6-453P-201ENST00000516819 85 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms