Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.275-201ENST00000364726 110 ntBASIC1.71□□□□□ -2.14
PRKNO60260 Y_RNA.310-201ENST00000365063 113 ntBASIC1.71□□□□□ -2.14
PRKNO60260 Y_RNA.368-201ENST00000365547 113 ntBASIC1.71□□□□□ -2.14
PRKNO60260 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.71□□□□□ -2.14
PRKNO60260 SNORD58.1-201ENST00000391313 66 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RNA5SP511-201ENST00000410487 115 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RNA5SP450-201ENST00000411206 102 ntBASIC1.71□□□□□ -2.14
PRKNO60260 CST2P1-201ENST00000425770 87 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RPS20P10-201ENST00000451209 253 ntBASIC1.71□□□□□ -2.14
PRKNO60260 MRPS17P9-201ENST00000511924 393 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RNU6-1278P-201ENST00000516130 107 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
PRKNO60260 RNU1-142P-201ENST00000516682 145 ntBASIC1.71□□□□□ -2.14
PRKNO60260 MIR4643-201ENST00000577473 78 ntBASIC1.71□□□□□ -2.14
PRKNO60260 AC004832.4-201ENST00000608952 331 ntBASIC1.71□□□□□ -2.14
PRKNO60260 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
PRKNO60260 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
PRKNO60260 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PRKNO60260 UBE2WP1-201ENST00000362030 340 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-801P-201ENST00000364087 105 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-117P-201ENST00000365415 107 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
PRKNO60260 Y_RNA.456-201ENST00000384232 111 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-1289P-201ENST00000384431 106 ntBASIC1.7□□□□□ -2.14
PRKNO60260 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-763P-201ENST00000390865 106 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNA5SP501-201ENST00000410990 112 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU6-651P-201ENST00000411040 105 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU2-14P-201ENST00000411053 191 ntBASIC1.7□□□□□ -2.14
PRKNO60260 AC010154.1-201ENST00000425857 269 ntBASIC1.7□□□□□ -2.14
PRKNO60260 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
PRKNO60260 AL163195.1-201ENST00000496941 348 ntBASIC1.7□□□□□ -2.14
PRKNO60260 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.7□□□□□ -2.14
PRKNO60260 RNU7-99P-201ENST00000516271 62 ntBASIC1.7□□□□□ -2.14
PRKNO60260 RNU7-128P-201ENST00000517247 62 ntBASIC1.7□□□□□ -2.14
PRKNO60260 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
PRKNO60260 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.7□□□□□ -2.14
PRKNO60260 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKNO60260 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
PRKNO60260 BX284668.6-201ENST00000606899 438 ntBASIC1.7□□□□□ -2.14
PRKNO60260 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKNO60260 AC068647.2-201ENST00000637380 353 ntBASIC1.7□□□□□ -2.14
PRKNO60260 U6.108-201ENST00000637764 58 ntBASIC1.7□□□□□ -2.14
PRKNO60260 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PRKNO60260 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PRKNO60260 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PRKNO60260 Y_RNA.65-201ENST00000362846 100 ntBASIC1.69□□□□□ -2.14
PRKNO60260 Y_RNA.217-201ENST00000364214 105 ntBASIC1.69□□□□□ -2.14
PRKNO60260 RNY1-201ENST00000364228 113 ntBASIC1.69□□□□□ -2.14
PRKNO60260 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
PRKNO60260 Y_RNA.515-201ENST00000384535 112 ntBASIC1.69□□□□□ -2.14
PRKNO60260 MIR515-2-201ENST00000384883 83 ntBASIC1.69□□□□□ -2.14
PRKNO60260 MIR515-1-201ENST00000384884 83 ntBASIC1.69□□□□□ -2.14
PRKNO60260 SNORA26.5-201ENST00000391215 123 ntBASIC1.69□□□□□ -2.14
PRKNO60260 BTF3P11-201ENST00000426582 477 ntBASIC1.69□□□□□ -2.14
PRKNO60260 Y_RNA.641-201ENST00000459414 105 ntBASIC1.69□□□□□ -2.14
PRKNO60260 RPL23AP42-201ENST00000471152 471 ntBASIC1.69□□□□□ -2.14
PRKNO60260 AC015720.1-201ENST00000565251 277 ntBASIC1.69□□□□□ -2.14
PRKNO60260 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
PRKNO60260 AL162424.1-201ENST00000602325 221 ntBASIC1.69□□□□□ -2.14
PRKNO60260 AC009779.6-201ENST00000603972 165 ntBASIC1.69□□□□□ -2.14
PRKNO60260 AL353997.5-201ENST00000618886 171 ntBASIC1.69□□□□□ -2.14
PRKNO60260 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.69□□□□□ -2.14
PRKNO60260 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
PRKNO60260 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKNO60260 RNU6-1272P-201ENST00000362776 107 ntBASIC1.68□□□□□ -2.14
PRKNO60260 RNU4-13P-201ENST00000364019 141 ntBASIC1.68□□□□□ -2.14
PRKNO60260 Y_RNA.269-201ENST00000364685 89 ntBASIC1.68□□□□□ -2.14
PRKNO60260 SNORA72.4-201ENST00000384174 132 ntBASIC1.68□□□□□ -2.14
PRKNO60260 MT-TR-201ENST00000387439 65 ntBASIC1.68□□□□□ -2.14
PRKNO60260 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
PRKNO60260 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
PRKNO60260 MTCO2P33-201ENST00000402100 465 ntBASIC1.68□□□□□ -2.14
PRKNO60260 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
PRKNO60260 Y_RNA.590-201ENST00000410140 107 ntBASIC1.68□□□□□ -2.14
PRKNO60260 AL603825.1-201ENST00000438481 80 ntBASIC1.68□□□□□ -2.14
PRKNO60260 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
PRKNO60260 U8.19-201ENST00000459095 133 ntBASIC1.68□□□□□ -2.14
PRKNO60260 RNU4-71P-201ENST00000516258 113 ntBASIC1.68□□□□□ -2.14
PRKNO60260 Y_RNA.679-201ENST00000516416 91 ntBASIC1.68□□□□□ -2.14
PRKNO60260 snoU18.1-201ENST00000629629 71 ntBASIC1.68□□□□□ -2.14
PRKNO60260 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
PRKNO60260 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
PRKNO60260 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PRKNO60260 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PRKNO60260 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
PRKNO60260 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PRKNO60260 RNA5SP276-201ENST00000362580 94 ntBASIC1.67□□□□□ -2.14
PRKNO60260 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKNO60260 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.67□□□□□ -2.14
PRKNO60260 AL162725.1-201ENST00000435405 301 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC104332.1-201ENST00000440471 797 ntBASIC1.67□□□□□ -2.14
PRKNO60260 Y_RNA.637-201ENST00000459424 114 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC091021.1-201ENST00000468051 388 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKNO60260 RNU6-138P-201ENST00000515952 107 ntBASIC1.67□□□□□ -2.14
PRKNO60260 RNA5SP458-201ENST00000516188 119 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC024995.1-201ENST00000523014 93 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC084364.2-201ENST00000546924 395 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms