Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-1337P-201ENST00000516525 95 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 AL591926.4-201ENST00000616895 298 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 MIR7111-201ENST00000619751 72 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 RNU6-1301P-201ENST00000362724 104 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 Y_RNA.88-201ENST00000363029 99 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 Y_RNA.101-201ENST00000363154 102 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU5F-3P-201ENST00000363767 117 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU6-163P-201ENST00000384396 106 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU6-1297P-201ENST00000384415 104 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU6-1215P-201ENST00000384441 102 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU6-601P-201ENST00000384540 107 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 Y_RNA.621-201ENST00000411065 96 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 AL139396.1-201ENST00000421137 167 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
CHMP2AO43633 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.61□□□□□ -2.31
CHMP2AO43633 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 AC245047.8-201ENST00000456455 284 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 LINC01399-202ENST00000458450 244 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.61□□□□□ -2.31
CHMP2AO43633 AC011352.1-201ENST00000512300 793 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 AC120024.3-201ENST00000603167 156 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 AC004467.1-201ENST00000615678 330 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
CHMP2AO43633 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 SNORD115-30-201ENST00000364117 82 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 Y_RNA.243-201ENST00000364481 109 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 Y_RNA.336-201ENST00000365307 109 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 SNORD116-4-201ENST00000384733 96 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 MIR891A-201ENST00000401237 79 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 MIR1298-201ENST00000408783 112 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 RNA5SP475-201ENST00000410568 110 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 RPL39P39-201ENST00000455840 151 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 ELOCP24-201ENST00000456370 334 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 RNU6-1278P-201ENST00000516130 107 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 AL512605.2-201ENST00000592972 256 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 AC011476.5-201ENST00000615594 130 ntBASIC0.6□□□□□ -2.31
CHMP2AO43633 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CHMP2AO43633 MIR410-201ENST00000362222 80 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 MIR1185-1-201ENST00000408598 86 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.59□□□□□ -2.31
CHMP2AO43633 MTCYBP10-201ENST00000424905 650 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 RPS20P10-201ENST00000451209 253 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.59□□□□□ -2.31
CHMP2AO43633 AC074133.1-201ENST00000515696 183 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 RNU7-28P-201ENST00000516759 62 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 Y_RNA.708-201ENST00000516950 96 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 RNU2-12P-201ENST00000517216 168 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CHMP2AO43633 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 AC007014.2-201ENST00000615581 479 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 AC087588.2-201ENST00000617667 426 ntBASIC0.59□□□□□ -2.31
CHMP2AO43633 RNU6-833P-201ENST00000363486 107 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 MIR598-201ENST00000384868 97 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 SNORA75.4-201ENST00000391278 119 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 MTND3P8-201ENST00000412909 339 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 MLLT10P1-201ENST00000418346 262 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 SNRPGP10-201ENST00000432323 225 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 AL162725.1-201ENST00000435405 301 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.58□□□□□ -2.32
CHMP2AO43633 AL357312.1-201ENST00000603879 298 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 AC092794.2-201ENST00000620933 563 ntBASIC0.58□□□□□ -2.32
CHMP2AO43633 RNA5SP264-201ENST00000363115 107 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 RNU6-708P-201ENST00000384217 107 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 Y_RNA.573-201ENST00000384763 105 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 MIR520G-201ENST00000385064 90 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 RNA5SP118-201ENST00000410385 109 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 RPL23AP50-201ENST00000434149 455 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.57□□□□□ -2.32
CHMP2AO43633 RNU7-90P-201ENST00000459216 62 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 SNORA18.7-201ENST00000516910 131 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 AP003716.2-201ENST00000528260 108 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.57□□□□□ -2.32
CHMP2AO43633 AC131055.1-201ENST00000584626 316 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 PVT1_3.1-201ENST00000620853 95 ntBASIC0.57□□□□□ -2.32
CHMP2AO43633 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CHMP2AO43633 RNU6-623P-201ENST00000363143 105 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU6-654P-201ENST00000364373 107 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 Y_RNA.361-201ENST00000365515 120 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 SNORD89-201ENST00000390981 114 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 AL031003.1-201ENST00000404229 172 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNA5SP95-201ENST00000410319 137 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU6-1199P-201ENST00000411249 104 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 MTCO2P27-201ENST00000420740 428 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 MIR2053-201ENST00000459295 91 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU7-169P-201ENST00000459456 61 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 CYCTP-201ENST00000504253 315 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU6-1012P-201ENST00000516606 109 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 RNU7-30P-201ENST00000516835 62 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.56□□□□□ -2.32
CHMP2AO43633 AL669831.3-213ENST00000636676 183 ntBASIC0.56□□□□□ -2.32
CHMP2AO43633 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms